Template-based Modeling Results for YCGN_ECOLI

Submitted Primary Sequence

>Length 153
MAEHLMSDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDEDTDEIYFTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLAEGKDLPAWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAEHLMSDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDEDTDEIYFTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLAEGKDLPAWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ
CCCCCCCCCCHHHCCCHHHCCHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECHHHHCCCCCCCCCCHHHHCCCCCCCCEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAEHLMSDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDEDTDEIYFTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLAEGKDLPAWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ
554322132211212113311221022002000100012021442210000000021022320303213311322320020032004303101210101100313301200000210320022241102100013231210120002213224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAEHLMSDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDEDTDEIYFTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLAEGKDLPAWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ
1	PPA-I	2kggA	0.122	0.268	1.316	threading_1	--------------------------------------------------------SVCAAQNCQRPCKDKVDWVQVCVGVSPEMAENEDYICINCA--------------------------------------------------------
2	HHPRED-g	1gte_A	0.181	0.974	1.011	threading_2	CFHCEKLENNFDDIKTLGERGALREAMRCLKCADCCTITSISN--KN--YYGAAKMIFSDLVCLCVGGCNLYATESINIGLQQEVFKAMNCLPISCASFLARLGYDIFEKQEYVGGEIELMKDLGVKIIGKSLSENEINTLKEEAFIGIGEPK
3	PPA-I	1qbhA	0.100	0.588	1.184	threading_3	-------------------------------------------------------------GSHMQTHAARFMYWPSSVPVQPEQLASAYYVGRNDDVKCFCCDGGLRCWES--GDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLE
4	PPA-I	1sf0A	0.121	0.379	1.140	threading_4	-----------------------------------------------------------------------------------------------KMIKVKVIGRNIEKEIEWREGMRDILRAVGFNVNGKVVLEDDEVKDGDFVEVIPVVSG
5	PPA-I	2k42B	0.194	0.235	1.107	threading_5	-----------------------------------------------------------------------GHMLPDVAQRLMQHLAEHGIQP---ARNMAEHIPPAPNW-------------------------------------------
6	PPA-I	3pf6A	0.089	0.366	1.107	threading_6	------------------------------------------------------------------------------------------------GSQFQEVRPVAQALYPTHPSTKDALEEARLLFPGGTHHDFRALGYHNTLVKVEEQC-
7	MUSTER	3mekA	0.143	0.961	0.649	threading_7	AVTPLRPGELLFRSDPL--VCKGSRGVVCDRCLLG-KEKLRCSQCRVAKYCSAKCQKKAWPDHKCKCLKSCKPRYPP-VRLLGRVVFKLDGAPSES--EKLYSFYDLESINKLTEDRKEGLRQLVQHFREEIQDASQLFDLFEAFAKCNAEQE
8	SPARKS	1c44a	0.144	0.771	0.810	threading_8	SAGDGFKANLVFKE--IEKKLEEEGEQFVKKIGGIFAFKVKDGPGGKEATWVV-----DVKNGKGSVLPN-SDKKADCITMADSDLLALGKMNPQ---SAFFQGK-------LITGNMGLAMKLQNLQLQPGKAKL-----------------
9	PROSPECT2	1u9aa	0.108	0.908	0.754	threading_9	LN----------MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITI----KQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVFAP
10	PPA-I	1hnsA	0.250	0.261	1.052	threading_10	-------------------------------------------------------------------------------------------AQRPAKYSYVDENGETKTW----TGQKKAMDEQGKSLDDFLIKQ------------------

Predicted Tertiary Structure


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TM-score=0.302 to 1we9A SCOP code=g.50.1.2	TM-score=0.404 to 1h7wD SCOP code=a.1.2.2	TM-score=0.698 to 1qbhA SCOP code=g.52.1.1	TM-score=0.494 to 1sf0A SCOP code=d.15.3.2	TM-score=0.305 to 1wgsA SCOP code=b.34.13.3