Template-based Modeling Results for YBJG_ECOLI

Submitted Primary Sequence

>Length 198
MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAVVLWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFPSDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIGCLSAQIIWQAMGHKLYQRLQSWYRVCFALPIRKGWVRD
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAVVLWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFPSDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIGCLSAQIIWQAMGHKLYQRLQSWYRVCFALPIRKGWVRD
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAVVLWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFPSDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIGCLSAQIIWQAMGHKLYQRLQSWYRVCFALPIRKGWVRD
223100100000012112101100000000020000000000000001012111100010000000000001000100213201132201201221222100020000000000000001110000000000000000000000000000000000000000000000210021012101100110001004211244
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAVVLWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFPSDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIGCLSAQIIWQAMGHKLYQRLQSWYRVCFALPIRKGWVRD
1	MUSTER	2akcB	0.163	0.929	1.590	threading_1	PAFRYDKEAYFKGYAIKGS-PRWKQAAEDADISVENIARIFSPVV-ISPKDTPETWNMLQNLLKVGGYYATASAKKYYMRTRPFVLFNHSTCRPEDKDGSYPSGHTAYSTLLALVLSQARPER-AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQPAFQKSLAKVREELND----------KNNLLS-
2	SPARKS	2a96a	0.162	0.934	3.106	threading_2	PAFRYDKEAYFKGYAIKGSPRWKQAAEDADISVENIARIFSPVVGAISPKDTPETWNMLQNLLKVGGYYATASAKKYYMRTRPFVLFNHSTCRPERKDGSYPSGHTAYSTLLALVLSQARPER-AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQPAFQKSLAKVREELNDKNNLL------------
3	PROSPECT2	1d2ta	0.133	0.914	2.189	threading_3	GAFLNDQAMYEQGRLL--RNTERGKLAAEDANLSSGGVANAFSGAFITEKDAPALHKLLTNMIEDAGDLATRSAKDHYMRIRPFAFYGVSTCNTQSKNGSYPSGHTSIGWATALVLAEINPQR-QNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHPAFQQQLQKAKAEFAQH--------------QK
4	PPA-I	2akcB	0.161	0.939	1.567	threading_4	PAFRYDKEAYFKGYAIKGSPRWKQAAEDADISVENIARIFSPVVGAISPKDTPETWNMLQNLLKVGGYYATASAKKYYMRTRPFVLFNHSTCRPEDKDGSYPSGHTAYSTLLALVLSQARPER-AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQPAFQKSLAKVREELNDKNNLLS-----------
5	HHPRED-l	2ipb_A	0.145	0.939	5.204	threading_5	PAFRYDKEAYFKGYAIKG-SPRWKQA-AEDADISVNIARIFSPVVAKINPKDTPETWNMLNLLKMGGYYATASAKKYYMRTRPFVLFNHSTCRTLRKDGSYPSGHDAYSTLLALVLSQARPER-AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARL------QTIPAFQKSLAKVREEL--NDKNNLLS-
6	HHPRED-g	1d2t_A	0.132	0.919	5.675	threading_6	IAFLNDQAMYEQGRLL--RNTERGKLAAEDANLSSGGVANASGAFGSPITEKD-APALHKLLTNMIDDLATRSAKDHYMRIRPFAFYGVSTCDKLSKNGSYPSGHTSIGWATALVLAEINPQ-RQNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLH--T----NPAFQQQLQKAKAEFAQHQK------
7	SP3	2a96a	0.155	0.944	2.825	threading_7	PAFRYDKEAYFKGYAIKGSPRWKQAAEDADISVENIARIFSPVVAKISPKDTPETWNMLQNLLKVGGYYATASAKKYYMRTRPFVLFNHSTCRPERKDGSYPSGHTAYSTLLALVLSQARPER-AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQT---------IPAFQKSLAKVREELNDKNNLL-
8	SAM-T99	1eoiA	0.133	0.833	2.611	threading_8	------------------RNTERGKLAAEDANLSSGGVANAFSGAFGSPITEKDAPALHKLLTNMIGDLATRSAKDHYMRIRPFAFYGVSTCNKLSKNGSYPSGHTSIGWATALVLAEINPQ-RQNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHTNPAFQQQLQKAKAEFAQH--------------
9	MUSTER	1eoiA	0.134	0.904	1.489	threading_9	IAFLNDQAMYEQGRLLRNT--ERGKLAAEDANLSSGGVANAFSGAFITEKDAPALHKLLTNMIEDAGDLATRSAKDHYMRIRPFAFYGVSTCNTTEKNGSYPSGHTSIGWATALVLAEINPQR-QNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHPAFQQQLQKAKAEFAQH----------------
10	SPARKS	1d2ta	0.121	0.919	3.065	threading_10	IAFLNDQAMYEQGRLLRN-TERGKLAAEDANLSSGGVANAFSGAFGITEKDAPALHKLLTNMIEDAGDLATRSAKDHYMRIRPFAFYGVSTCNTQSKNGSYPSGHTSIGWATALVLAEINPQR-QNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHPAFQQQLQKAKAEFAQHQK--------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.817 to 1eoiA SCOP code=a.111.1.1	TM-score=0.834 to 1eoiA SCOP code=a.111.1.1	TM-score=0.817 to 1eoiA SCOP code=a.111.1.1	TM-score=0.812 to 1eoiA SCOP code=a.111.1.1	TM-score=0.823 to 1eoiA SCOP code=a.111.1.1