Template-based Modeling Results for YBIH_ECOLI

Submitted Primary Sequence

>Length 223
MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQNIAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRACRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDANDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGLSQRSL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQNIAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRACRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDANDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGLSQRSL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQNIAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRACRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDANDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGLSQRSL
5433322232320141001001200032013100210033031110000100211110010002100210032022102202211222323322022001200210121122322110020001220122200220022002201210020012113232322201000000000000010001001220222212331022022001100100121114323
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQNIAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRACRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDANDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGLSQRSL
1	MUSTER	1t33A	0.850	0.987	2.372	threading_1	MNIPTTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ---
2	SPARKS	1t33a	0.850	0.987	3.410	threading_2	MNIPTTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ---
3	PROSPECT2	1t33A	0.850	0.987	2.720	threading_3	MNIPTTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ---
4	PPA-I	1t33A	0.850	0.987	1.993	threading_4	MNIPTTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ---
5	HHPRED-l	1t33_A	0.850	0.987	2.147	threading_5	MNIPTTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ---
6	HHPRED-g	1t33_A	0.850	0.987	1.852	threading_6	MNIPTTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ---
7	SP3	1t33a	0.850	0.987	3.029	threading_7	MNIPTTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ---
8	SAM-T99	1t33A	0.850	0.987	2.364	threading_8	MNIPTTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ---
9	MUSTER	2fbqA	0.159	0.933	1.779	threading_9	--------AQSETVERILDAAEQLFAEKGFAETLRLITSKAGVNLAAVNYHFGSKKALIQAVFSRFLGPFCASLEKELDRRQAK---PEAQHATLEDLLHLLVSQAMAVRSGNDLSIFMRLLGLAFSQSQGHLRKYLEEVYGKVFRRYMLLVNEAA-PKLPPIELFWRVHFMLGAAAFSMSGIKALRAMAETDFGVN---TSTEQVMHLMVPFFAAGMRAESG
10	SPARKS	2fbqa	0.149	0.933	2.343	threading_10	--------AQSETVERILDAAEQLFAEKGFAESLRLITSKAGVNLAAVNYHFGSKKALIQAVFSRFLGPFCASLEKELDRRQA---KPEAQHATLEDLLHLLVSQAMAVKPRSGLSIFMRLLGLAFSQSQGHLRKYLEEVYGKVFRRYMLLVNEAA-PKLPPIELFWRVHFMLGAAAFSMSGIKALRAMAETDFGVNTS---TEQVMHLMVPFFAAGMRAESG

Predicted Tertiary Structure


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TM-score=0.992 to 1t33A SCOP code=a.4.1.9	TM-score=0.992 to 1t33A SCOP code=a.4.1.9	TM-score=0.992 to 1t33A SCOP code=a.4.1.9	TM-score=0.992 to 1t33A SCOP code=a.4.1.9	TM-score=0.992 to 1t33A SCOP code=a.4.1.9