Template-based Modeling Results for YBHA_ECOLI

Submitted Primary Sequence

>Length 272
MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCHHHHHHHHHHCCCCHHHCCCCEECCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCHHHEEEECCCHHHHHHHHHCCCEEECCCCCHHHHHHCCEECCCCCCHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
45010000001100022342013201300130251201000001211210120033020210000010000011322100011102221012002002423020000022100022221101200211321223222211212112201331321010001232231023003103431202001012100100222011021012003112021200000010100010010000000111023101120210022121200020012212
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
1	MUSTER	1rkqA	0.240	0.967	3.066	threading_1	LAIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRISYYTVHESFVATIP-------LVFCEAEKM--DPNTQFLKVMMIDEPAILDQAIARIPQEVKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVL
2	SPARKS	3niwa	0.244	0.934	4.248	threading_2	-KYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRNEGFILSYNGGEIINWESKEY--ENVLPNEVVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNK----------AIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQINVFRSEPYFLELVPQGIDKALSLSVLLENIGTR-EEVIAIGDGYNDLSIKFAGGV---AGNAQEPVKKAADYITLTNDEDGVAEAIERIF-
3	PROSPECT2	3r4cA	0.245	0.945	3.917	threading_3	HMIKVLLLDVDGTLLSFEHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEI-DAVPYD-GVIALNGAECVL-RDGSVIRKVAIPAQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVE-------HPVPPVVDIEEMFERKECCQ--LCFYFDEEAEQKVMPLLS---GLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKHFVI
4	PPA-I	1rkqA	0.235	0.971	4.020	threading_4	LAIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKM--------DPNTQFLKVMMIDEPAILDQAIARIPQEVKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVL
5	HHPRED-l	1nrw_A	0.248	0.963	2.634	threading_5	---KLIAIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVSTGRAHFDV-SIFEPLGIKTWVISANGAVIHDPE-GRLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELFRSANDQYSQSGFAYINSFQELADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKS-LEAAGKGVA-GNAREDIKSIADAVTLTNDEHGVAH--KHLL-
6	HHPRED-g	3niw_A	0.257	0.930	2.348	threading_6	-KYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELR-NGFILSYNGGEIINWESKE--YENVLPNEVVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNK-AIRET------NDFLTD---ITLPVAKCLIVGDAGKLIPVESELCIRLKINVFRSEPYFLELVPQGIDKALSLSVLLENIG-TREEVIAIGDGYNDLS-IKFAG-GVA-GNAQEPVKKAADYITLTNDEDGVAEAIERIF-
7	SP3	3niwa	0.244	0.934	4.367	threading_7	-KYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRNEGFILSYNGGEIINWESKEY--ENVLPNEVVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNK----------AIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQINVFRSEPYFLELVPQGIDKALSLSVLLENIGT-REEVIAIGDGYNDLSIKFAGG---VAGNAQEPVKKAADYITLTNDEDGVAEAIERIF-
8	SAM-T99	1rkqA	0.227	0.971	3.631	threading_8	-AIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMD-------PNTQFLKVMMIDEPAILDQAIARIPQEVKEYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVL
9	MUSTER	1nf2A	0.242	0.956	2.958	threading_9	M-YRVFVFDLDGTLLNDNLEISEKDRRNIEKLSR-KCYVVFASGRMLVSTLNVEKKYKRTFPTIAYNGAIVYLP-EEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSN-------VDYRVEPNLSELVS--KMGTTKLLLIDTPERLDELKEILSERFVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIST
10	SPARKS	3r4ca	0.241	0.945	4.178	threading_10	HMIKVLLLDVDGTLLSFEHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEI-DAVPYD-GVIALNGAECVL-RDGSVIRKVAIPAQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVE-------HPVPPVVDIEEMFERKE--CCQLCFYFDEEAEQKVMPLLS---GLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKHFGV

Predicted Tertiary Structure


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TM-score=0.966 to 1rkqA SCOP code=c.108.1.10	TM-score=0.970 to 1rkqA SCOP code=c.108.1.10	TM-score=0.865 to 1nf2A SCOP code=c.108.1.10	TM-score=0.845 to 1rkqA SCOP code=c.108.1.10	TM-score=0.968 to 1rkqA SCOP code=c.108.1.10