Template-based Modeling Results for YADL_ECOLI

Submitted Primary Sequence

>Length 201
MMTFKNLRYGLSSSVVLAASLFSVLSYAATDSIGLTVITTVEMGTCTATLVNDSDQDISVVDFGDVYISEINAKTKVKTFKLKFKDCAGIPNKKAQIKLTKRATCEGTANDGAGFANGSTAADKASAVAVEVWSTVTPATGSATQFSCVTPASQEVTISTAANAVVYYPMSARLVVEKNKTVNNVTAGKFSAPATFTVTYN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMTFKNLRYGLSSSVVLAASLFSVLSYAATDSIGLTVITTVEMGTCTATLVNDSDQDISVVDFGDVYISEINAKTKVKTFKLKFKDCAGIPNKKAQIKLTKRATCEGTANDGAGFANGSTAADKASAVAVEVWSTVTPATGSATQFSCVTPASQEVTISTAANAVVYYPMSARLVVEKNKTVNNVTAGKFSAPATFTVTYN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEECCCCCEEEEEECCCEEHHHCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCCCEECEEEEEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMTFKNLRYGLSSSVVLAASLFSVLSYAATDSIGLTVITTVEMGTCTATLVNDSDQDISVVDFGDVYISEINAKTKVKTFKLKFKDCAGIPNKKAQIKLTKRATCEGTANDGAGFANGSTAADKASAVAVEVWSTVTPATGSATQFSCVTPASQEVTISTAANAVVYYPMSARLVVEKNKTVNNVTAGKFSAPATFTVTYN
541232111000000000000000001112320101020102211020101233322000010020102202332221202020220211321202021133120311122120102112123302000010012223223212101011322120101212222110100010003434222201002020101010226
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMTFKNLRYGLSSSVVLAASLFSVLSYAATDSIGLTVITTVEMGTCTATLVNDSDQDISVVDFGDVYISEINAKTKVKTFKLKFKDCAGIPNKKAQIKLTKRATCEGTANDGAGFANGSTAADKASAVAVEVWSTVTPATGSATQFSCVTPASQEVTISTAANAVVYYPMSARLVVEKNKTVNNVTAGKFSAPATFTVTYN
1	MUSTER	2jtyA	0.231	0.776	1.431	threading_1	-------------------------AATTVNGGTVHFKGEVVNAACAV----DAGSVDQTVQLGQVRTASLAQESSAVGFNIQLNDCDTNVASKAAVAFLGTAI---DAGHTNVLALQSSAAGSATNVGVQILDRTGAALTLD-----GATFSSETTL---NNGTNTIPFQARYFA-----TGAATPGAANADATFKVQYQ
2	SPARKS	3jwng	0.184	0.701	2.768	threading_2	------------------------------ADVTITVNGKVVAKPCTV---STTNA---TVDLGDLYSFSLGAASAWHDVALELTNCP-VGTSRVTASFSGAADSTG----------YYKNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDS---------SQSAHFPLQVRAL----TVNGGATQGTIQAVISITYTYS
3	PROSPECT2	2j2zB	0.128	0.736	1.436	threading_3	RAA---------------------------------FHGEVVRPACTLAMEDAWQ----IIDMGETPVRDLGFSGPERKFSLRLRNCEFNSQGGNLF--SDSRIRVTFDGVRGETPDKFNLSGQAKGINLQIADVRGN----------IARAGKVMPAIPLTGNEEALDYTLRIVRNGKK----LEAGNYFAVLGFRVDYE
4	PPA-I	2uy7B	0.182	0.766	2.194	threading_4	-------------------------------QGKVTFNNTVVDAPCSISQKSADQS----IDFGQLSKSFLGGVSKPMDLDIELVNCDITAFKGGNGAKKGTVKLAFTGPIVNG-HSDELDTNGGTGTAIVVQGAGKNVVFDG----------SEGDANTLKDGENVLHYTAVVKKS-SAVGAAVTEGAFSAVANFNLTYQ
5	HHPRED-l	2jty_A	0.227	0.766	4.028	threading_5	-------------------------AATTVNGGTVHFKGEVVNAACAVDAG----SVDQTVQLGQVRTASLAATSSAVGFNIQLNDCDTNVASKAAVAFLGTAI---DAG-HTNVLALSSAAGSATNVGVQILDRTGAALTLDGAT-----FSSET---TLNNGTNTIPFQARYFAT----G-AATPGAANADATFKVQY-
6	HHPRED-g	2uy6_B	0.181	0.716	3.888	threading_6	---------------------------------KVTFNNTVVDAPCSISQKS----ADQSIDFGQLSKSFLGGVSKPMDLDIELVNCDITAFKTVKLAFTGPIVN-----GHSDELDT---NGGTGL-AIVV-QGAGKNVVFDGSEG------DANTL---KDGENVLHYTAVVKKSS-AVGAAVTEGAFSAVANFNLTYQ
7	SP3	3jwne	0.185	0.751	2.702	threading_7	------------------------------ADSTITIRGYVRDNGCSVAAESTN----FTVDLMENAAKQFGATTPVVPFRILLSPCG-NAVSAVKVGFT--GVADSHNAN---LLALENTVSAAAGLGIQLLNEQQNQIPLN------APSSALSWTTLTPGKPNTLNFYARLMA----TQVPVTAGHINATATFTLEYQ
8	SAM-T99	2jmrA	0.212	0.751	2.591	threading_8	--------------------------MADST---ITIRGYVRDNGCSVAAES-TNFT---VDLMENAAKQFNNITPVVPFRILLSPCGNA-VSAVKVGFT--GVADSHNANLLALENTV---SAASGLGIQLLNE---QQNQIP----LNAPSSALSWTTLTPKPNTLNFYARL----MATQVPVTAGHINATATFTLEYN
9	MUSTER	2jmrA	0.197	0.756	1.428	threading_9	-----------------------------MADSTITIRGYVRDNGCSV----AAESTNFTVDLMENAAKQFNNTTPVVPFRILLSPCGNAVSA-VKVGFTGVADSHNAN-----LLALENTVSAASGLGIQLLNEQ----QNQIPLNAPSSALSWTTLTPGKP--NTLNFYARLMA----TQVPVTAGHINATATFTLEYQ
10	SPARKS	3jwne	0.185	0.751	2.732	threading_10	------------------------------ADSTITIRGYVRDNGCSVAA----ESTNFTVDLMENAAKQFNNTTPVVPFRILLSPCGNAVS---AVKVGFTGVADSHNAN---LLALENTVSAAAGLGIQLLNEQQNQIPLN------APSSALSWTTLTPGKPNTLNFYARLMA----TQVPVTAGHINATATFTLEYQ

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.653 to 1klfP SCOP code=b.2.3.2	TM-score=0.832 to 2uy7B SCOP code=b.2.3.2	TM-score=0.643 to 1pdkB SCOP code=b.2.3.2	TM-score=0.804 to 2j2zB SCOP code=b.2.3.2	TM-score=0.823 to 2uy7B SCOP code=b.2.3.2