Template-based Modeling Results for XYLB_ECOLI

Submitted Primary Sequence

>Length 484
MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA
CEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCEECCCHHHHHHHCCCCCCEEEECHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA
2010001010001000013402000111240322112321022003200300030022003302231010000002120000011323101100001112013002202321231111001100100000101002411230031024001010000020001000000100000000013230022002003013320020230231002013200421112201000000010000000001120200000000000000122222434100000000031200010000000000100041022131310011034133113100000000022001001201000000113010210010011000100110020034022302100001100303100000010020202022222201000000000010212310210032031221121223112002200300240032013115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA
1	MUSTER	2nlxA	0.994	0.983	4.109	threading_1	MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFL--------PYLSPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA
2	SPARKS	3ll3a	0.242	0.973	6.600	threading_2	LYIIGDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID-GKIAAISWSSQH-SLIGLGSDDELLTNSITWADNCAKSIVQDAKNRGFQIYRKTGPHPAP---IYKLLWLKNKKTEVFSQAQKWIGIKEYIIFRLTGKLVTD-TTAAGTGILNLKTLTWDQELLDILKIKKEQLPKIAQPTKVIFPIKTEYVKKLGIDDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPIDPSASYFCYPAD--KTHYLLGGPVNNGGIVFNWARQTLFDADPQDFLDVAQTAPAGSRNLIFLPYLGGERAPIWDANARGSFVGLTRHQK--PEARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVTK---EQQSGTLAAFLARQALGLNQDLSEIGQFAQADKVYFPNPKEAATYQKLFPLYCEIRNALAASYG
3	PROSPECT2	2itmA	0.998	0.983	5.900	threading_3	MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYL--------SPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA
4	PPA-I	2nlxA	0.994	0.983	5.473	threading_4	MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFL--------PYLSPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA
5	HHPRED-l	2itm_A	1.000	0.981	4.013	threading_5	MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLS--------PQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLM-
6	HHPRED-g	3ll3_A	0.253	0.965	3.291	threading_6	YIIG-DVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKIDGK-IAAISWSSQ-HSLIGLGSDDELLTNSITWADNCAKSIVQDAKNRGFAQQIKTG---HP-APIYKLLWLKNKKTEVFSQAQKWIGIKEYIIFRLTGKLVTDTT-AAGTGILNLKTLTWDQELLDILKIKKEQLPKIAQPTKVIFPIKTEYVKKLGIDDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPKIDPS--ASYFCYPAKTHYLLGGPVNNGGIVFNWARQTLFETPQDFLD-VAQTAPAGSRNLIFLPYLGGERAPIWDANARGSFVGLTR-HQKPE-ARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVT-KE-QQSGTLAA-FLARQALGLNQDL-SEIGFAQADKVYFPNPKEAATYQKLFPLYCEIRNALAASYG
7	SP3	3ll3a	0.240	0.971	6.739	threading_7	LYIIGDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID-GKIAAISWSSQHS--LIGGSDDELLTNSITWADNCAKSIVQDAKNRGFQIYRKTGPHPAP---IYKLLWLKNKKTEVFSQAQKWIGIKEYIIFRLTGKLVTD-TTAAGTGILNLKTLTWDQELLDILKIKKEQLPKIAQPTKVIFPIKTEYVKKLGDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPIDPSASYFCYPAD--KTHYLLGGPVNNGGIVFNWARQTLFDADPQDFLDVAQTAPAGSRNLIFLPYLGGERAPIWDANARGSFVGLTRHQK--PEARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVTK---EQQSGTLAAFLARQALGLNQDLSEIGQFAQADKVYFPNPKEAATYQKLFPLYCEIRNALAASYG
8	SAM-T99	2nlxA	1.000	0.983	5.215	threading_8	MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLS--------PQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA
9	MUSTER	3gbtA	0.244	0.973	3.699	threading_9	LYIIGDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID-GKIAAISWSSQH-SLIGLGSDDELLTNSITWADNCAKSIVQDAKNRGFQIYRKTGPHPA---PIYKLLWLKNKKTEVFSQAQKWIGIKEYIIFRLTGKLVTD-TTAAGTGILNLKTLTWDQELLDILKIKKEQLPKIAQPTKVIFPIKTEYVKKLGISDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPKIDPSA--SYFCYPAKTHYLLGGPVNNGGIVFNWARQTLFDATPQDFLDVAQTAPAGSRNLIFLPYLGGERAPIWDANARGSFVGLTRHQK--PEARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVTK---EQQSGTLAAFLARQALGLNQDLSEIGQFAQADKVYFPNPKEAATYQKLFPLYCEIRNALAASYG
10	SPARKS	3kzba	0.257	0.979	6.410	threading_10	YIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWWQSVDARRVSAIVLSGQQNFLP-LDQDHEPLHRAVLYSDKRPLKEAEEINARHGNLWSALENPTAASI-LPKLVFWRASFPQAFGRLRHVLGAKDYVVLRLTGRHATDRTNASTTGLYRPKDDAWHVELLADYGFSLDL-PRLLEPGEQVGGVSALAARQTGVSGTPVLCGLGDAGAATLGVGVLDDEDAYLHLGTTGWLARLTTDPVGDPVGTIFRLAGIIAGKTLQVAPVLNAGNILQWALTLVGHRPGEDCAEYFHAAVTVPDGLLFVPYLHAERCPVELPAPRGALLGVTGATTRAQILLAVLEGAALSLRWCAELL---GEKVGLLKVVGGGARSEAWLRIADNLNVSLLVKPDA-HLHPLRGLAALAAVELEWSHSIQDFLREARESNILHPQPCDEGRRRRKFERFKQCVETLGR---

Predicted Tertiary Structure


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TM-score=0.557 to 1huxA TM-score=0.994 to native SCOP code=c.55.1.5	TM-score=0.566 to 1huxA TM-score=0.990 to native SCOP code=c.55.1.5	TM-score=0.564 to 1huxA TM-score=0.902 to native SCOP code=c.55.1.5	TM-score=0.554 to 1huxA TM-score=0.995 to native SCOP code=c.55.1.5	TM-score=0.557 to 1huxA TM-score=0.994 to native SCOP code=c.55.1.5

Experimental Structure

Download 2itmA

SCOP code=c.55.1.10