Template-based Modeling Results for WCAM_ECOLI

Submitted Primary Sequence

>Length 464
MPFKKLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHDWIASFKQAFSEGQTVVVPAGLVCDNINTGIFIPPGKTLHILGSLRGNGRGRFVLQDGSQVTGEDGGSMHNITLDVRGSDCTIKGLTMSGFGPVTQIYIGGKNKRVMRNLIIDNLTVSHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDRDILISDHVIERINCTNGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIKARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNFRVNDIQLDNTHLAYKLRGIQISAGNAVSFVALTNIEMKRASLELHNKPQHFFMRNINVMQESSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAVNEKGQSSVDIDRINHHIVNVEKINFRLPELRE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPFKKLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHDWIASFKQAFSEGQTVVVPAGLVCDNINTGIFIPPGKTLHILGSLRGNGRGRFVLQDGSQVTGEDGGSMHNITLDVRGSDCTIKGLTMSGFGPVTQIYIGGKNKRVMRNLIIDNLTVSHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDRDILISDHVIERINCTNGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIKARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNFRVNDIQLDNTHLAYKLRGIQISAGNAVSFVALTNIEMKRASLELHNKPQHFFMRNINVMQESSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAVNEKGQSSVDIDRINHHIVNVEKINFRLPELRE
CCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEHHHCCCCCHHHHHHHHHCCCCEEEECCCCEECCCCCCEEECCCCEEEEEEEEECCCCEEEEEECCCEEECCCCCEEEEEEEEEECCCEEEEEEEECCCCCEEEEEECCCCCHHHHCCEECCEEEECCCHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEEECCCCEEEEHHEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHEEEEECCCCCHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCEEEEEEEECCEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCEEEEEEEEEEEHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPFKKLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHDWIASFKQAFSEGQTVVVPAGLVCDNINTGIFIPPGKTLHILGSLRGNGRGRFVLQDGSQVTGEDGGSMHNITLDVRGSDCTIKGLTMSGFGPVTQIYIGGKNKRVMRNLIIDNLTVSHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDRDILISDHVIERINCTNGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIKARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNFRVNDIQLDNTHLAYKLRGIQISAGNAVSFVALTNIEMKRASLELHNKPQHFFMRNINVMQESSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAVNEKGQSSVDIDRINHHIVNVEKINFRLPELRE
55343223210110000001011110220323210003212232000002200331210101100101202100001302101010002122301000120010114421201100000211101020010121010010002132331132010110000101110012001220210101103023031100100000133200002100110202103011000000111212231222200310000103222021001023021000110313301231133111320100010020000010301111000000000202102023202000000123312230200101222011000001020220012123222100021020022131121010103011113110102311001000021024323121313212120000120213134279
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPFKKLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHDWIASFKQAFSEGQTVVVPAGLVCDNINTGIFIPPGKTLHILGSLRGNGRGRFVLQDGSQVTGEDGGSMHNITLDVRGSDCTIKGLTMSGFGPVTQIYIGGKNKRVMRNLIIDNLTVSHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDRDILISDHVIERINCTNGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIKARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNFRVNDIQLDNTHLAYKLRGIQISAGNAVSFVALTNIEMKRASLELHNKPQHFFMRNINVMQESSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAVNEKGQSSVDIDRINHHIVNVEKINFRLPELRE
1	MUSTER	3gqnA1	0.190	0.851	0.757	threading_1	-----------------------HFADLVIKQFGVSVKTYGAKDDIRAFEKAIESGFPVYVPYGTFM--VSRGIKLPSNTVLTAVIRFMDSVRGESLMYNENVTTGNENIFLSSFTLDGNN-KRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDIDITCGGLDYPYLGAPNPSENIWIENCEATGF-GD---DGITTHHQYINILN-----CYSHDPRTANCNGFEIDGSVLSNNHGDAPAAYNSINGHMSVEDVRSFRHIGHAKNIVASNLVSIRPKRGFQDNATP--RVLAVSAYYGVVINGLDDPNLLTE-TVVSVQFR-----ARNCSLNGVVLTGFSNSEN--GIYVIGGRGGDAVNISNVTL-------NNSGRY----GV------SIGSGIE---NVS--ITNISGIGDGINSPVALVSTINSNPESGLSSIG-YPTVARVTDYN-DGLTLFN
2	SPARKS	3jura	0.163	0.845	1.171	threading_2	----------ELAKKIEEEILNHVREPQIPDR-EVNLLDFGATDCSESFKRAIEGGGRLIVPEGFLTGPIH----LKSNIELHVKGTIKFIPDPERY--LPVVLTRFEGIELYNYSPLVYALD--CENVAITGSG---VLDGSADNEHWWPWKGKKDFGWKEGLQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISSTGP-----------NNDG------IDPESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIVPSEYILVRDNLVISQAS---HGGLVIGS----EMSGGVRNVVARNNVYMNVERALRLKTNSRRG-GYMENIFFI------DNV-----AVNV-------SEEVIRINLRYDNE-------EGEYLPVVRSVFVKNLKATGGVRIEGLNDYVKDILISDTIIEGAKI
3	PROSPECT2	1ru4A	0.114	0.776	1.695	threading_3	ADCS------------------SDLTSGISTKRIYYVAPNGNSSNFSAAMAAVNPGELILLKPGTYTIPYGNTITFNKSGKDGAPIYVAAANCGRAVFDFSF---PDSQWVQASYGFYVTGDYWYFKGVEVTRAGYQG-AYVIGSHN--------------------------------TFENTAFHHNRNTGLEINN--GGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGN--------RFVGCRAWENSDDGFDLFDSPQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGGN-------QAVGNHRITRSVAFGNVSKGFDQNNNAGGVTVINNTSYKNGINYGFGSNVQ-------------------SGQKHYFRNNVSLSASVTVSNADAKSNSWDTGPAA-----SASDFVSLDTSLATVSRDNDGTLPETS---------LFRLSANRN
4	PPA-I	3gqnA1	0.168	0.849	1.113	threading_4	----------------HFADLVIQVIDELKQFG-VSVKTYGAKDDIRAFEKAIESGFPVYVPYGTFM--VSRGIKLPSNTVLTAVIRFMDSGRGESLMYNENVTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIAVDCTLHGIDITCGGLDYPYLGDGTTAPNPWIENCEATGFGDDGITTH---HSQYINILNCYSHD----PRLTANCNGFEIDDG-----------SRHVVLSNNRSKGCNGHMSVEDVRSYNFRHIGHHAATAPQSVSANATPRVLAVSAYYGVVINGTDDPNLLTE-TVVSVQFRA-----RNCSLNGVVLTGFSNSEN--GIYVIGGRGGDAVNISNVTLNRYGVSIGSGIENVSITNI-SGIGDGINSPVAL----------VSTINSNPEIS--GLSSIG------------YPTVARVAGTDYNDGLTLF
5	HHPRED-l	3gq8_A	0.170	0.888	1.899	threading_5	----------------HFADLVIQVIDE-LKQFGVSVKTYGATDDIRAFEKAIESGFPVYVPYGTF--MVSRGIKLPSNTVLTGAGVIRFMDSVG----RGESLM-------YNENVTTGNENIFLSSFTLDGNNKRISG-IGGSRESNCHNVYIRDIEAVDCTLDYLGDGTAPPSENIWIENCEATGFGDDGITT---HHSQYINILNCYSHNNRSKG--CYGGIEIKAH----G----DAPAAYNISINGMSVEDVRSYNFRHIGHHIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPLLTET-VVSVQFRA--RNCSLNGVVLTGFSNSE--NGIYVIGSRGGDAVNISNVTLNNSGVSIGSGIENVSITNISGIGDGINSPVAVSTINGLTLFNGAFRASTTSSGKIHSEGFIMASVSSKTSSERSTHNLLSSYGI--NTTGSY-
6	HHPRED-g	3jur_A	0.163	0.716	1.977	threading_6	----ELAKK-----------IEEEILNHVIPDREVNLLDFGATDCSESFKRAIEEGGRLIVPEGVF---LTGPIHLKSNIELHVKGTIKFIPDPVLTRFEGIELYNYSALDCENVAIDGSADNVLVEGVKIINSPMWC-IHPVL-----SENVIIRNIEISS--TGPNNDGIDPESKYMLIEKCRFD-TGDDSVVIKSGRPSEYILVRDNLVIS---QAS---HGLVIGSEMS---------GGVRNVVARNNVYMNVERALRLKSRRGGYMENIFFIDNVAVNVSEEVINLEGEYLPVVRSVFVKNLKATGGK-Y---AVRIEGLENDYVKDILISDTIIEGAKISVLLEFGQGMENVIMNGSRFEKLYIEGKALL-------------------------K-------------------------------------------------------------
7	SP3	3gq7a	0.229	0.905	0.894	threading_7	---------------HHFADLVIQVIDEL-KQFGVSVKTYGATDDIRAFEKAIESGFPVYVPYGTFM--VSRGIKLPSN------TVLTGAGKRNAVIRDSVGMYNENVTFLSSFTLDSRESNVYIRDIEAVGIGGLDYPYLGTTAPNPSENIWIENC-EATGFGDD---GIHHS-QYINILNCYSHDLTANCNGFEIDDGSRHVVLSNNRSK--GCYKAHGDAHMSVEDVGHHAATA-PQSVSAKNIVASNLVSATPR-VLAVSAYYGVVINGLTGYTDDPNLARNTGFSNSENGIYGGDAVNISNVTLNNSGGVSIGSGI---------ENVSITNISGIGDGIN-SPVALVSTINSNPEISGLSSIGYPTVARTDYNDGLTLFNGAFRA-STTSSGKIHSEGFIMGSTSGCEASVSKSGVLTSSSSKTSSEDEQFAYGINTTGSYKVNFEKINWELDSLNG
8	SAM-T99	2vzxH	0.214	0.433	0.583	threading_8	EGKGKPYEGTQTANLTVKEGAPLPFSYDILTTAVNRVFTKYPEDIPDYFKQSFPEGYSWERTMTFEDKGICT-----------IRSDISLEGDCFF-------------------------QNVRFKGTNFPPNGPVMQKKTLKWEPSTEKLHVRDGLLVGNINMALLLEGGGHYLCDFKTTYKAKKVVQ--------------------------------------------------------------------------LPDAHFVDHRIEILGNDSDYNKVKLYE------------------------------------------------------------------------------------------------------------------------------------------HAVARYSPLPSQVWHHHHHH---------------
9	MUSTER	3jurD	0.187	0.843	0.689	threading_9	MEE---------LAKKIEEEILNHVREPQIPDREVNLLDFGARDCSESFKRAIEEGGRLIVPEGFLT----GPIHLKSNIELHVKGTIKFDFEGIELYNYSPLVYALDC---ENVAITGSG---VLDG---SADNEHWWPWKGKKDF--GWKEGLPN------QQEDVKKLKEMAERGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEG--VKIINS----PMWCIHPV--LS------------ENVIIRNIENND----IDPESCKYMLIEKCRFD--TGDVVIKSGRDADGRRIGVSEYILVRDNLVISHGGLVIGS---EMS--GGVRNVVARNNVYMNVE-----RALRLKTGGYMENIFFIDNVAVNVSINLRYLPVSVFVKNLKA---TGGKYAVRIEGLENDYVKDILIS--DTIIEGAKISVLLEF--GQLGMENVIMNGSRFEKLYIEGKALLK
10	SPARKS	3suca	0.180	0.884	1.151	threading_10	---------------------HDLVIQVIDELKQVSVKTYGATDDIRAFEKAIESGFPVYVPYGTFM--VSRGIKLPSNTVLTGA----GKRNAVIRFMDSV---GRGESLMYNENVTTGNENIFLSSFTLDGNNGQGISGIGGSRESNLHNVYIRDIEAVDCTLHITCGGLDYPYLGDWIENCEATGFGDDGITQYINILNRHVVLSNNRSK--GCYGGEIDAPYNISINGHSVEDVRPQSVSAKNIVASNLVNATPRVLAV-SAYYGVVINGLTGYTDDPNLL-----TETVVSVFRARNCSLNGVVLTGFSNSENGIYVIGG------SR-GGDAVNISNVTLN-NSGRYGVSIGSGIENVSITNISGIGDGINVSTINSNPEISGLSSIGYPTVARVAGTDYN-----DGLTLFNGAFRASTTSSGKIHSEG---FIMGSTSGCEASVSKSGVLTSSSSK

Predicted Tertiary Structure


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TM-score=0.610 to 1dboA SCOP code=b.80.1.4	TM-score=0.756 to 1bheA SCOP code=b.80.1.3	TM-score=0.758 to 1bheA SCOP code=b.80.1.3	TM-score=0.825 to 1ru4A SCOP code=b.80.1.9	TM-score=0.589 to 1ia5A SCOP code=b.80.1.3