Template-based Modeling Results for URK_ECOLI

Submitted Primary Sequence

>Length 213
MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEECCCCEEEEECCHHCCCHHHHHHHCEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE
553433210000000101101110010002102321233200000010113222312233323222311100001000210210342220201001123323233212123320000200100122202221201000102221000120211133222213200210231012003310211332000000202314000000212014225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE
1	MUSTER	3asyA	0.498	0.944	3.592	threading_1	-----PKPFVIGIAGGTASGKTTLAQALARTLG-----ERVALLPMDHYYKDLGHLPLEERLRVNYDHPDAFDLALYLEHAQALLRGLPVEMPVYDFRAYTRSPRRTPVRPAPVVILEGILVLYPKELRDLMDLKVFVDADADERFIRRLKRDVLERGRSLEGVVAQYLEQVKPMHLHFVEPTKRYADVIVPRGGQNPVALEMLAAKALAR--
2	SPARKS	1udwa	0.361	0.948	4.443	threading_2	------EPFLIGVSGGTASGKSSVCAKIVQLL-----QKQVVILSQDSFYRVLTQKAKALKGQFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGILAFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDILN
3	PROSPECT2	3asyA	0.498	0.944	4.195	threading_3	-----PKPFVIGIAGGTASGKTTLAQALARTLGER-----VALLPMDHYYKDLGHLPLEERLRVNYDHPDAFDLALYLEHAQALLRGLPVEMPVYDFRAYTRSPRRTPVRPAPVVILEGILVLYPKELRDLMDLKVFVDADADERFIRRLKRDVLERGRSLEGVVAQYLEQVKPMHLHFVEPTKRYADVIVPRGGQNPVALEMLAAKALA--R
4	PPA-I	3asyA	0.498	0.944	4.697	threading_4	-----PKPFVIGIAGGTASGKTTLAQALARTLG-----ERVALLPMDHYYKDLGHLPLEERLRVNYDHPDAFDLALYLEHAQALLRGLPVEMPVYDFRAYTRSPRRTPVRPAPVVILEGILVLYPKELRDLMDLKVFVDADADERFIRRLKRDVLERGRSLEGVVAQYLEQVKPMHLHFVEPTKRYADVIVPRGGQNPVALEMLAAKALAR--
5	HHPRED-l	1uj2_A	0.359	0.967	2.442	threading_5	------EPFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYQVVILSQDSFYRVLTSEQKAKKGQFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGILAFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDIL-
6	HHPRED-g	3aez_A	0.209	0.967	3.126	threading_6	LGPDRPVPFIIGVAGSVAVGKSTTARVLQALLARWDHHPRVDLVTTDGFLYPNAE-LQRRNLMHRKGFPESYNRRALMRFVTSVKSGSDACAPVYSHLHYDIIPAEQVVRHPDILILEGLNVLQTGPVSDLFDFSLYVDARIEDIYVSRFLAMRTTAFADPESHFHHYRTINRPNLVENILPTRPRATLVLRKDADHSINR-LRLRKL-----
7	SP3	1udwa	0.361	0.948	4.297	threading_7	------EPFLIGVSGGTASGKSSVCAKIVQLL-----QKQVVILSQDSFYRVLTSKAKALKGQFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGILAFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDILN
8	SAM-T99	3asyA	0.498	0.944	6.735	threading_8	-----PKPFVIGIAGGTASGKTTLAQALARTLGER-----VALLPMDHYYKDLGHLPLEERLRVNYDHPDAFDLALYLEHAQALLRGLPVEMPVYDFRAYTRSPRRTPVRPAPVVILEGILVLYPKELRDLMDLKVFVDADADERFIRRLKRDVLERGRSLEGVVAQYLEQVKPMHLHFVEPTKRYADVIVPRGGQNPVALEMLAAKALAR--
9	MUSTER	1xrjB	0.353	0.972	3.346	threading_9	------EPFLIGVSGGTASGKSSVCAKIVQLLGQNYRQKQVVILSQDSFYRVLTSKAKALKGQFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGILAFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDILN
10	SPARKS	1esma	0.256	0.953	3.638	threading_10	GTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHPNQV--LKERGLKKKGFPESYDH-RLVKFVSDLKSGVPVTAPVYSHLIYDVIDGDKTVVQPDILILEGLNVLQSGFVSDFVDFSIYVDAPEDLLQTWYINRFLKFREGAAIKTATLWKEINWLNLKQNILPTRERASLILTKSANHAVEEVRLRK-------

Predicted Tertiary Structure


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TM-score=0.882 to 1xrjB SCOP code=c.37.1.6	TM-score=0.879 to 1xrjB SCOP code=c.37.1.6	TM-score=0.905 to 1xrjB SCOP code=c.37.1.6	TM-score=0.859 to 1xrjB SCOP code=c.37.1.6	TM-score=0.882 to 1xrjB SCOP code=c.37.1.6