Template-based Modeling Results for UBIB_ECOLI

Submitted Primary Sequence

>Length 546
MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWMPNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAFKEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGATLVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWMPNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAFKEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGATLVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEHHHCCCCEEEEEEECCEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWMPNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAFKEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGATLVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR
442310320110010000100120023120210020011011213232213200220020024111100200100031221013300310120234022131320121013203222031003202320100000100010202441220001012130220030002001200200230023133030220022013101200111210100220132034131010020023101310000110310201212102422220310022002000110031000001101000000223243010000000000202430121002000000221032002000301213332213201200220022014221221201200210020023131302110000010001020002200130100210220022003321223100310121022003202300310220132032223102211321222212201110000000000000000011222100000000000000001012323
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWMPNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAFKEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGATLVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR
1	MUSTER	1b3uA	0.105	0.943	0.939	threading_1	DSLYPIAVLIDELRVQLRLNSIKKLSTIALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFGPCLLPPLESLATVEEVVRDKAVESLRAISHEHS-------PSDLEAHF--VPLVKRLAG-GDWFTSRTSACGL--SVCYPRVSSAVKAELRQYFRNLCSDTPMVRRAAASKLGEFAKVELDNVKSEIIPMFSNLASQDSVRLLAVEACVNIAQLLPQEDLLVMPTL--EDKSWRVMVADKFTGPEITKVPAFQNLMKDCEAEVRAAASHKVKEFCEN--LSADCRENVILVSDANQHVKSALASVIMGLSPIKDNTIEHLLPLFLAQLKDECPEVRLNIISLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRV-RLAIIEYMPLLAGQLGVEFFEKLNSLCMAWLV--------DHVYAIREAATSNLKKLVEK-FGKEWAHATIIPKVLAMSGD--PNYLHRMTTLFCIN---VLSEVCGQDITTKHMLPTVLRMAANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTVDVKYFAQE
2	SPARKS	1f3mc	0.138	0.504	1.249	threading_2	----------------------------------------------------------------------------------------------------SDEEILEKLRSIVSVGDPKKKYTRFEK--IGQGASGTVYTAMDVATGQEVAIRQ--------------------------MNLQQQPK--------KELIINEILVMRENKNIVNYLDSYLVGDEL-------------WVVMEYLAG---GSLTDVVTETC----MDEGQIAAVCRECLQAQVIHRDIKSDNILL----GMDGSVKLTDFGFCAQITT-------------MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG--EPPYLNENPLRALYLIATNGTQNPEKLSAIFRDFLNRCLDM-------DVEKRG--SAKELLQHQFLKIAKPLSSLTPLIAAAKEATK---------------------------------------------------------------------------------------
3	PROSPECT2	1qgra	0.103	0.996	2.013	threading_3	MELITIKFLERAAVENLPTFLVELSRVLANPAAGLQIKNSLTSKDPDIKAQYQQREVKNYVLHTLPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILKEEPSLEFTKANFDKESERHFIMQVVCEATQCPDTRVTIEAMKSDIDEVALQGIEFWSNVCDEEMDLNDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYMPTLIELMKDPSVVVRDTAAAINDVYLAPLEGLSAEPRSNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETDRPDGHQNNLRSSAYESLMEIVKNSTLVIMERLQQVLQMESHIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFSGGVQEDALMAVSTLVYMEAFKPFLYAEYQVCLAAVGLVGDLCRA--LQSNIIPFCDEVMQLLLENLPQILSVFGDIALAIGGEFKKYLEVVLNTLQQDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAG
4	PPA-I	1b3uA	0.093	0.927	0.979	threading_4	------------------YPIAVLIDELRNENSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFGDWFTSRTSACGL-FSVCYPRVSSAVKAELRQYFRNLCSDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPALVMPTLRQAAEDKSWRVR----------YMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAE-----VRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDENEVIGIRQLSQSLLPAIVE--LAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEV----CGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQ
5	HHPRED-l	3pvu_A	0.117	0.769	1.988	threading_5	VTFEKIF-SQKLGYLL----FRDFCLKHEAKPLVEFYEEIKKYEKETEERLVCSREIF-------DTYIMKE--LLACSHPFSKSAIEHVQGHLVKVPPDLFQPYIEEICQNLRG-DVFQKFIESDKFTIGRGGFGEVYGCRKADTGKMYAMKCLDK-------------------------------------KRIKMKQGETLALNERIMLSLVSTG--DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMAAEIILG-LEHMHNRFVVYRDLKPANILLDE----HGHVRISDLGLACDFSKKKPHAS--------VGTHGYAPEVLQKGVAYDSSADWFSLGCMLFKLLR--GHSPFRQKDK----HEIDRMTLTMAVSFSPELRSLLEGLL-------QRDVNRRLQEVKSPFFRSLFLQKYPPP-----------------------------DSDQRNFPLTISERQQEFDTINAETDKTKNKQLGHEEALGKDCIMHGYMS-KMG--------------WQRR-
6	HHPRED-g	2y7j_A	0.178	0.495	2.201	threading_6	-----------------------------------------------------------------------------------------------------------------EL-PDWAAAKEFYQDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSP--------------------------EQLEEVREATRRETHILRQVA-------GHP-----HIITLSYESSSFMFLVFDLMRKGELFDYLTE-KVA-----LSEKETRSIMRSLLENNIVHRDLKPENILLDD----NMQIRLSDFGFSCHLEPGEKL-----------R------ELCGTPGYLAPEI----LKCS-MDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM---LRMIM--EG---QYQFSSPEWD-------------------------------DRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER-----------------------------------------------------
7	SP3	1o6ya	0.159	0.451	1.251	threading_7	-------------------------------------------------------------------------------------------------------------------TP-SHLSDRYEGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--------------------------LARD-----PSFYLRFRREAQNAAALNAIVAVYDTGEAETPAGP--LP-------YIVMEYVDGVTL--RDIVHTEG----PMTPKRAIEVIADACQAGIIHRDVKPANIMIS----ATNAVKVMDFGIRAIAQ-----YLSPEQAR--GDSV-------------DARSDVYSLGCVLYEVLTPFTGDSPVSV-AYQHVREDPIPPSARHEGLSADLDAVVLKALAK-------NPE-NRYQTAAEMRADLVRVHN---------------------------------------------------------------------------------------------------------
8	SAM-T99	3f69B	0.218	0.478	1.330	threading_8	TTPSHLSDRYELGEILGFGGMSE------------------------------------------------------------------------------------------------------------------VHLARDLRDHRDVAVKVLRADLAR-------------------DPSF------------------YLRFRREAQNAAALNH----------PAIVAVYDTGEAIVMEYVDGVTLRDIVHTETPKRAIEVIADACQALNFSH--QNGIIHRDVKPANILIS----ATNAVKVVDFGI---------------------------ARAIADSGNSVQ--------------------------TIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV----LTGEPPFTGDSPVSVAYQHVREDPIPPSARHE----------GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN---------------------------------------------------
9	MUSTER	2ooeA	0.104	0.879	0.815	threading_9	MAEKKLEENPY---LDAWSILIREAQNQPIDKARKTYERLVAQFPSSGR---FWKLYIEAEIKAKNVEKLFQRCLMKVLHILWKCYLSYVRETKGKLP-----SYKEKMAQAY-DFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAE---RITA--VRRVYQRGCVNMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRN-APSVPDMWKKYIQ-----WEKSNPLRTEDQTLITKR---VMFAYEQCLLVLHHPDIWYEAAQYLEQSSKLLAEKGDMNNA--------------KLFSDEAANIYERAISTLLKKNMLLYFAYAYEESRMKYEKVHSIYNRLLAI------EDIDPTLVYIQYMKFARRAE---------IKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKD-------KSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNE--DNNTRVLFERVLTSGS--LPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFKETALLVDR
10	SPARKS	1u5qa	0.187	0.529	1.234	threading_10	---------------------------------------------------------------------------------------------------------DPDVAELFFKDDPEKLFSDLRE--IGHGSFGAVYFARDVRNSEVVAIKKMS------------------------YSGKQ-------SNEKWQDIIKEVRFLQK-----------LRHPN--TIQYRGCYLREHWLVMEYCLG---SASDLLEVHK---KPLQEVEIAAVTHGALQGNMIHRDVKAGNILLS----EPGLVKLGDFGSASIMAPANPYWMAPEVILAMDE------------GQYDGKVDVWSLGITCIELAE--RKPPLFNMNAMSALYHIAQSPALQSGHWSEYFRNFVDSCL-------QKIPQ-DRPTSEVRFVL-----RERPPTVIMDLIQRTKDAVRELDNLQYRKMKKILFQEA---------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.902 to 1b3uA SCOP code=a.118.1.2	TM-score=0.877 to 1b3uA SCOP code=a.118.1.2	TM-score=0.642 to 1yhwA SCOP code=d.144.1.7	TM-score=0.639 to 1qgkA SCOP code=a.118.1.1	TM-score=0.853 to 1b3uA SCOP code=a.118.1.2