Template-based Modeling Results for TRML_ECOLI

Submitted Primary Sequence

>Length 157
MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRLRRAGLDYHEFTAVTRHHDYRAFLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPETRGLPASILDALPAEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGAVLRD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRLRRAGLDYHEFTAVTRHHDYRAFLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPETRGLPASILDALPAEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGAVLRD
CEEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEEEECCHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRLRRAGLDYHEFTAVTRHHDYRAFLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPETRGLPASILDALPAEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGAVLRD
2000001213112100000100111102000022101222232012001310100000102103100321332100000121221001021330000000122420122002202021101011123020000000000000100132223212245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRLRRAGLDYHEFTAVTRHHDYRAFLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPETRGLPASILDALPAEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGAVLRD
1	MUSTER	1j85A	0.756	0.994	4.238	threading_1	MLDIVLYEPEIPQNTGNIIRLCANTGFRLHLIEPLGFTWDDKRLRRSGLDYHEFAEIKRHKTFEAFLESEKPKRLFALTTKGCPAHSQVKFKLGDYLMFGPETRGIPMSILNEMPMEQKIRIPMTANSRSMNLSNSVAVTVYEAWRQLGYKGAVNL-
2	SPARKS	3l8ua	0.405	0.943	5.081	threading_2	RNHVVLFQPQIPANTGNIARTCAATNTSLHIIRPMGFPIDDKKM-YWDLD------VHFYDSLNDFMNICSG-KLHLITKFANKTYSDENYDDSHYFLFGREDKGLPEEFMRQ-HSEKALRIPVNDQVRSLNLSNTVCMIVYEALRQQDFIGLELSH
3	PROSPECT2	3e5yA	0.565	0.981	3.685	threading_3	MFNVVLVEPEIPPNTGNVIRLCANTGARLHLIEPLGFPLDDAKMRRAGLDYHEYAQMRVHRDWDAFVAAEAPDRMFAFTTRGSGRFHDRAFEPGDWFVFGAETRGLAPALVDRFAPEQRVRLPMRPGNRSLNLSNTVAVVVFEAWRQAGFEGG---A
4	PPA-I	1j85A	0.756	0.994	6.162	threading_4	MLDIVLYEPEIPQNTGNIIRLCANTGFRLHLIEPLGFTWDDKRLRRSGLDYHEFAEIKRHKTFEAFLESEKPKRLFALTTKGCPAHSQVKFKLGDYLMFGPETRGIPMSILNEMPMEQKIRIPMTANSRSMNLSNSVAVTVYEAWRQLGYKGAVNL-
5	HHPRED-l	3n4j_A	0.832	0.987	3.960	threading_5	MLNIVLFEPEIPPNTGNIIRLCANTGCQLHLIKPLGFTWDDKRLRRAGLDYHEFADIKHHHDYQAFLDSEKTQPLFALTTKGTPAHSAVSYQANDYLLFGPETRGLPAYILDALPAQQKIRIPMQADSRSMNLSNAVSVVVYEAWRQLGYPGALL--
6	HHPRED-g	3n4j_A	0.839	0.987	3.505	threading_6	MLNIVLFEPEIPPNTGNIIRLCANTGCQLHLIKPLGFTWDDKRLRRAGLDYHEFADIKHHHDYQAFLDSEKPARLFALTTKGTPAHSAVSYQANDYLLFGPETRGLPAYILDALPAQQKIRIPMQADSRSMNLSNAVSVVVYEAWRQLGYPGALL--
7	SP3	3l8ua	0.405	0.943	5.211	threading_7	RNHVVLFQPQIPANTGNIARTCAATNTSLHIIRPMGFPIDDKKM-YWDLD------VHFYDSLNDFMNICSG-KLHLITKFANKTYSDENYDDSHYFLFGREDKGLPEEFMRQHS-EKALRIPVNDQVRSLNLSNTVCMIVYEALRQQDFIGLELSH
8	SAM-T99	1j85A	0.765	0.975	6.333	threading_8	MLDIVLYEPEIPQNTGNIIRLCANTGFRLHLIEPLGFTWDDKRLRRSGLDYHEFAEIKRHKTFEAFLESEKPKRLFALTTKGCPAHSQVKFKLGDYLMFGPETRGIPMSILNEMPMEQKIRIPMTANSRSMNLSNSVAVTVYEAWRQLGYKGA----
9	MUSTER	3e5yA	0.565	0.981	4.134	threading_9	MFNVVLVEPEIPPNTGNVIRLCANTGARLHLIEPLGFPLDDAKMRRAGLDYHEYAQMRVHRDWDAFVAAEDPARMFAFTTRGSGRFHDRAFEPGDWFVFGAETRGLAPALVDRFAPEQRVRLPMRPGNRSLNLSNTVAVVVFEAWRQAGFEGGA---
10	SPARKS	1j85a	0.756	0.994	4.637	threading_10	MLDIVLYEPEIPQNTGNIIRLCANTGFRLHLIEPLGFTWDDKRLRRSGLDYHEFAEIKRHKTFEAFLESEKPKRLFALTTKGCPAHSQVKFKLGDYLMFGPETRGIPMSILNEMPMEQKIRIPMTANSRSMNLSNSVAVTVYEAWRQLGYKGAVNL-

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.993 to 1j85A SCOP code=c.116.1.1	TM-score=0.993 to 1j85A SCOP code=c.116.1.1	TM-score=0.859 to 1j85A SCOP code=c.116.1.1	TM-score=0.925 to 1j85A SCOP code=c.116.1.1	TM-score=0.993 to 1j85A SCOP code=c.116.1.1