Template-based Modeling Results for PTTBC_ECOLI

Submitted Primary Sequence

>Length 473
MMSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANARPKEIEQLPMVKGCFTNAGQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARHNMKWHEQLISHFAVIFFPLLPALISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFLWLIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWDFGMFSIAKVGYQAQVIPALLAGLALGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHALIGPFGRMIGDGVAFAVRHLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDLQMIQSMGGTPVWPLIALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVMANGIGVGGLPGILSIQPSYWQVFALAMAIAIIIPIVLTSFIYQRKYRLGTLDIV
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANARPKEIEQLPMVKGCFTNAGQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARHNMKWHEQLISHFAVIFFPLLPALISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFLWLIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWDFGMFSIAKVGYQAQVIPALLAGLALGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHALIGPFGRMIGDGVAFAVRHLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDLQMIQSMGGTPVWPLIALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVMANGIGVGGLPGILSIQPSYWQVFALAMAIAIIIPIVLTSFIYQRKYRLGTLDIV
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEECCCCCCCHHHHHCCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANARPKEIEQLPMVKGCFTNAGQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARHNMKWHEQLISHFAVIFFPLLPALISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFLWLIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWDFGMFSIAKVGYQAQVIPALLAGLALGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHALIGPFGRMIGDGVAFAVRHLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDLQMIQSMGGTPVWPLIALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVMANGIGVGGLPGILSIQPSYWQVFALAMAIAIIIPIVLTSFIYQRKYRLGTLDIV
55232132002200320103100100000000000202422303231034032010001122101000023001002000221232323333233223322322220011002001100100000000100110001121131221121122132001001000100000000000000023020120000000000000301001211232220010011201102120200000000000000221033101300330111000000000000010010021002000100200020210000000000000001100011000000010032111110100000000000000000001123331131011000000000000000000031310000000000000000000000000000000000000112200000000000000000000000122232232334
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANARPKEIEQLPMVKGCFTNAGQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARHNMKWHEQLISHFAVIFFPLLPALISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFLWLIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWDFGMFSIAKVGYQAQVIPALLAGLALGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHALIGPFGRMIGDGVAFAVRHLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDLQMIQSMGGTPVWPLIALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVMANGIGVGGLPGILSIQPSYWQVFALAMAIAIIIPIVLTSFIYQRKYRLGTLDIV
1	PROSPECT2	1b3ua	0.090	0.992	2.134	threading_1	LRNEDVQLRLNTIALALGVERTRSELLPFLTDT---IYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLETVVRDKAVESLRAISHEHSPSDLEARLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASVRLLAVEACVNIAQLLPQEDLEALVMPTLRQDKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENVIMSQILPCIKELVSQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDARLAIIEYMPLLAGQLSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAG-DPVANVRFNVAKSLQKIGPILDNSTLQSEVKPITVLSLA
2	SPARKS	3ipja	0.263	0.201	2.512	threading_2	SNANKYNKIANELIKII-GEDNIISITHCATRLRVMVKDREIINDKKVEKVDEVKGVFFTSGQYQIILGTGIVNKVYAEVEKMGLKTLSKKEQDEL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	PPA-I	3ipjA	0.263	0.201	1.403	threading_3	SNANKYNKIANELIKIIGE-DNIISITHCATRLRVMVKDREIINDKKVEKVDEVKGVFFTSGQYQIILGTGIVNKVYAEVEKMGLKTLSKKEQDEL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	PROSPECT2	1jdha	0.089	0.924	2.002	threading_4	LNDEDQVKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETAHHREGLLAIFKSGGIPALVGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLA-GGLQKMVALLNK---TNVKFLAIT--TDCLQILA-----YGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGM-QALGL---------------------HLTDPSQRLVQNCLWTLRNLSEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCGIEALVRTVLRAGDRE---DITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAELLHSRNEGVA
5	HHPRED-l	3bp3_A	0.203	0.167	5.153	threading_5	---TGTSE-APALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKL-GAAGVVVAGSGVQAIFGTKSDNLKTE-DEYIRN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	HHPRED-g	3ipj_A	0.277	0.199	4.410	threading_6	SNANKYNKIANELIKIIG-EDNIISITHCATRLRVMVKDREIINDKKVEKVDEVKGVFFTSGQYQIILGTGVNKVYAE-VEKMGLKTLSKKEQDEL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	SPARKS	3qnqa	0.132	0.786	1.150	threading_7	--------------------------------------------------------------------------------------RFLEKYVMPVAGKVAE--QRHLLAIRDGLVLTMPFLIIGSIFLIISTLPGYSEFMASLFGKNWNVALGYPVSAFNI----MALIAVFGIAYRLGEYYKVDALASGALSLVTFLPFQVAYIMPGTKESILVD-GVIPAALMGSQG-LFVAMIIAIISTEIYRFLVQKVPPAVTRSFIPGFIVVTVVWIIRLIFGSIHNVVGKLLQEPLSILGASLWGAVIAVILVHVLWAC---GIHGVMSPIWLSLMDQNGQDVTITAQFFDLWATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSGAA-VILFSGYLGSGGISGVILQLVNFALAFVIYLPFLKIWDKQGEA---
8	SP3	3ipja	0.263	0.201	2.401	threading_8	SNANKYNKIANELIKI-IGEDNIISITHCATRLRVMVKDREIINDKKVEKVDEVKGVFFTSGQYQIILGTGIVNKVYAEVEKMGLKTLSKKEQDEL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	PROSPECT2	1gw5a	0.086	0.913	1.894	threading_9	GM-RGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKYVCKLLFIFLLGHDINLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLAEMAEAFAGEIPKILVDSVKQSAALCLLRLYRTSP--------DLVPMGDWTSRVVHLLNDLGVVTAATSLITTLAQK----NPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFV------PAPWLSVKLLRLLQCPAVRGRLTECLETILNKAHSNAKNAVLFEAISLIIHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKETVINALKTERDVSVRQRAVDLNAQQIVAEMLSYLETADYSIREEIVLKVAILAEKYATWYVDTI-----LNLIRIAGDYVSEEVWYRVIQIVINDVQGYAAKTVFEALQAPACHENLVKVGGYILG------------EFG-----
10	SAM-T99	3ipjA	0.277	0.199	5.976	threading_10	SNANKYNKIANELIKIIG-EDNIISITHCATRLRVMVKDREIINDKKVEKVDEVKGVFFTSGQYQIILGTGVNKVYAEVEKM-GLKTLSKKEQDE---------------------------------------L--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.693 to 1b3uA SCOP code=a.118.1.2	TM-score=0.725 to 1b3uA SCOP code=a.118.1.2	TM-score=0.384 to 1f9nB SCOP code=a.4.5.3	TM-score=0.901 to 1xm9A SCOP code=a.118.1.24	TM-score=0.386 to 1f9nB SCOP code=a.4.5.3