Template-based Modeling Results for YAJL_ECOLI

Submitted Primary Sequence

>Length 196
MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE
CCCEEEEEECCCCEEEEEEHHHHHHHHCCCEEEEEEEECCCCEEEECCCCEEEEECCCHHHCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCCCCCCEEECCCHHHHHCCCCEEECCCEEEECCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE
5411000000310120100100100141312010000223332102122102010111022022231000000101201201320220020022025331000000000000013131132120000120123033221123200111311000020020012001100110123310210023010121022124
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE
1	MUSTER	3ot1A	0.413	0.964	3.081	threading_1	-SKRILVPVAHGSEE-ETVIIVDTLVRAGFQVTAAV---GDKLQVQGSRGVWLTAEQTLEACSAEAFDALALPGGVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVF-AKQQKFVGARTCHPNFFDHIPSERLSRQRVCYYATQHLLTSQGPGTALEFALAIALLA-GVELAQHVAAPVLHPQQLTELID
2	SPARKS	2ab0a	1.000	0.995	3.654	threading_2	-SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE
3	PROSPECT2	2ab0A	1.000	0.995	3.934	threading_3	-SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE
4	PPA-I	3b38A	0.404	0.934	3.920	threading_4	ASKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDP--VQCSRDVVICPDASLEDAKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAVICA-GPTALLAHEIGFGSKVTTHPLAKDKMGHYTYSENRVEKDG--LILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVLK--------
5	HHPRED-l	2ab0_A	1.000	0.990	3.976	threading_5	-SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYY-
6	HHPRED-g	2ab0_A	1.000	0.995	3.232	threading_6	-SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE
7	SP3	3ot1a	0.418	0.964	3.858	threading_7	-SKRILVPVAHGSEE-ETVIIVDTLVRAGFQVTAAVG---DKLQVQGSRGVWLTAEQTLEACSAEAFDALALPGGVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVF-AKQQKFVGARTCHPNFFDHIPSERLSRQRVCYYATQHLLTSQGPGTALEFALAI-ALLAGVELAQHVAAPVLHPQQLTELSG
8	SAM-T99	3b38A	0.399	0.934	4.290	threading_8	ASKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGK--DPVQCSRDVVICPDASLEDAKKEPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAVICAGPT-ALLAHEIGFGSKVTTHPLAKDKMMNYTYSENRVEKDG--LILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVLK--------
9	MUSTER	3b38A	0.404	0.934	3.057	threading_9	MAKRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDP--VQCSRDVVICPDASLEDAKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAVICA-GPTALLAHEIGFGSKVTTHPLAKDKMGGHTYSENRVEKDG--LILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVLK--------
10	SPARKS	3ot1a	0.418	0.964	3.598	threading_10	-SKRILVPVAHGSEE-ETVIIVDTLVRAGFQVTAAV---GDKLQVQGSRGVWLTAEQTLEACSAEAFDALALPGGVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVF-AKQQKFVGARTCHPNFFDHIPSERLSRQRVCYYATQHLLTSQGPGTALEFALAI-ALLAGVELAQHVAAPVLHPQQLTELSG

Predicted Tertiary Structure


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TM-score=0.814 to 1g2iA TM-score=0.935 to native SCOP code=c.23.16.2	TM-score=0.817 to 1g2iA TM-score=0.931 to native SCOP code=c.23.16.2	TM-score=0.823 to 1g2iA TM-score=0.999 to native SCOP code=c.23.16.2	TM-score=0.823 to 1g2iA TM-score=0.999 to native SCOP code=c.23.16.2	TM-score=0.832 to 1g2iA TM-score=0.911 to native SCOP code=c.23.16.2

Experimental Structure

Download 2ab0A

SCOP code=c.23.16.2