Template-based Modeling Results for TFAR_ECOLI

Submitted Primary Sequence

>Length 191
MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGNALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTSTAQDIEWPALP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGNALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTSTAQDIEWPALP
CCEEEECCCCEEEEEEEECCCCCEECCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCCEEEEEEEEECCCCEEEECCCCCCCEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGNALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTSTAQDIEWPALP
43020023321020000011121000311120132110111001121222320100001243220100211312101013212201011002123200112231311212221112223122212122122112211210131011021001232123310210210220010023012220321411229
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGNALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTSTAQDIEWPALP
1	PROSPECT2	1ks9a	0.094	1.000	1.002	threading_1	MVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTSTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDVIIHVANGITHIGPARQQDGVLPDVAWHNNIRAELWRKLAVNNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHT
2	HHPRED-l	2kz6_A	0.198	0.503	3.806	threading_2	--------------------------------------------------------------MLLHSVETPRGEILNVSE---QEARDVFG-----ASEQAI---------------ADARKATILQTLRIERDERLRACDWT--------QVQ-DVVLTADQKATWAKYRQALDLPETVTDLQIVWPQL-
3	HHPRED-g	2kz6_A	0.185	0.482	3.818	threading_3	-------------------------------------------------------------------------MLLHSVETPRGEILSEARVFGASEQA-----------------IADARKATILQTLRIERDERLRACDWT--------QVQ-DVVLTADQKATWAKYRQALDLPETVTDLQIVWPQLP
4	MUSTER	3myrB	0.138	0.990	0.747	threading_4	DWGERGEGLGNFLCYGDLPTGASL-DPATFLFPRGAILDRDLSTIHEVDLEATGEIQEFVNH-SWYEYSVGNDRGLHPYEGQTNLEYDRRGGVAPPYKQLDVSDGYSRWKGRSVEVGPLARVLMLYATGHDQARELVDSTLSRLTLGRTAARALESKILVDAMQGWYDGLIANVKSGDTKTFNETLWPSWP
5	SPARKS	2kz6a	0.134	0.508	0.703	threading_5	------------------------------------------------------------------------------------MLLHSVETPRGEILNVSEQEARDVFGASEQ-AIADARKATILQTLRIERDERLRACDWTQVQ---------DVVLTADQKATWAKYRQALRDLTVTDLSQIVWPQLP
6	PROSPECT2	1k0ia1	0.065	0.974	0.980	threading_6	MGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCD-----YIAGCDGFHGISRQSIPAERMQHGRLFLAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGRGELLERYSAICLRRIWKAERFSWWMTSVLHRFPDTLPYEEIE
7	PPA-I	2kz6A	0.165	0.508	0.867	threading_7	-------------------------------------------------------------------------------------MLLHSVETPRGEILNVSEQEARDVFGASEQAIADARKATILQTLRIERDERLRACDWTQVQ---------DVVLTADQKATWAKYRQALRDLTVTDLSQIVWPQLP
8	HHPRED-l	3kvp_A	0.219	0.168	0.788	threading_8	NHFGV--EDGYIKIYEYNESRNEVKLKKEYADDE-------------------------------------------------------------------------------------------------------------------------------------------------------------
9	HHPRED-g	1mda_H	0.155	0.539	0.583	threading_9	SHTLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVGHSGSDFDLPDAPRVVHAIIAAQDGASDNYANSAEVLDIYDAASDQDQSSVELDKGPESLSVQNEA----------------------------------------------------------------------------------------
10	SP3	3cbta	0.130	0.969	0.461	threading_10	ILWRYRENGGPARPVTVVRDDADWLAPGTECVKPADGTPVHLEPLATRYTKPRTVQRDQWFGTGLKLARPGEAWSVWLFWDPGWRFKNWYVNLERPLTRWEGVDSEDHFLDISVHPDRTWHWRDEDEFAQALRDGLDPASAGRVRRAGRSAVAEIRAWGSP-FADGWEHW-----RPDPAPVPSLDWDRTP

Predicted Tertiary Structure


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TM-score=0.579 to 2ofpB SCOP code=a.100.1.7	TM-score=0.404 to 2hr5A SCOP code=a.25.1.1	TM-score=0.406 to 1rq0A SCOP code=e.38.1.1	TM-score=0.505 to 1ubmL SCOP code=e.18.1.1	TM-score=0.508 to 3ck9B SCOP code=a.118.8.6