Template-based Modeling Results for SGCC_ECOLI

Submitted Primary Sequence

>Length 437
MFDYILSLGGTVFVPIIMIVIGLIFRIPWLQAIKAGVTVGIGFVGMGLVIVMAIDSLSPPIKVMIERFGLALHVFDVGAGPASGVGYATAIGAMIIPVIFLLNVAMLVTRLTKTMNVDIYNYWHYAITGTVVQLMTGSLIYGVLGAICHAALSLKMADWTAKRVQNIVGLEGISIPQGYGSSSVPLFVLLDAIYEKIPFMKGRNIDAQEIQKRYGMVGDPVIIGVVLGLIFGLAAGEGFKGCASLMITVAAIMVLFPRMIRLIVEGLLPISDGARKFFQKYFKGREVYIGLDTAVTLGHPTTIAVGLLLIPIMLILASILPGNKVLPLADLPVAPFFICMATVIHRGDLVRTLISGVIVMITVLLIATQFAPYFTEMALKGGFSFAGESAQISALSVGNMFGWSISELMSLGIIGVVVAVGIVASVVLFLRKRELSE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFDYILSLGGTVFVPIIMIVIGLIFRIPWLQAIKAGVTVGIGFVGMGLVIVMAIDSLSPPIKVMIERFGLALHVFDVGAGPASGVGYATAIGAMIIPVIFLLNVAMLVTRLTKTMNVDIYNYWHYAITGTVVQLMTGSLIYGVLGAICHAALSLKMADWTAKRVQNIVGLEGISIPQGYGSSSVPLFVLLDAIYEKIPFMKGRNIDAQEIQKRYGMVGDPVIIGVVLGLIFGLAAGEGFKGCASLMITVAAIMVLFPRMIRLIVEGLLPISDGARKFFQKYFKGREVYIGLDTAVTLGHPTTIAVGLLLIPIMLILASILPGNKVLPLADLPVAPFFICMATVIHRGDLVRTLISGVIVMITVLLIATQFAPYFTEMALKGGFSFAGESAQISALSVGNMFGWSISELMSLGIIGVVVAVGIVASVVLFLRKRELSE
CCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFDYILSLGGTVFVPIIMIVIGLIFRIPWLQAIKAGVTVGIGFVGMGLVIVMAIDSLSPPIKVMIERFGLALHVFDVGAGPASGVGYATAIGAMIIPVIFLLNVAMLVTRLTKTMNVDIYNYWHYAITGTVVQLMTGSLIYGVLGAICHAALSLKMADWTAKRVQNIVGLEGISIPQGYGSSSVPLFVLLDAIYEKIPFMKGRNIDAQEIQKRYGMVGDPVIIGVVLGLIFGLAAGEGFKGCASLMITVAAIMVLFPRMIRLIVEGLLPISDGARKFFQKYFKGREVYIGLDTAVTLGHPTTIAVGLLLIPIMLILASILPGNKVLPLADLPVAPFFICMATVIHRGDLVRTLISGVIVMITVLLIATQFAPYFTEMALKGGFSFAGESAQISALSVGNMFGWSISELMSLGIIGVVVAVGIVASVVLFLRKRELSE
43210111101000000000000003021220030000000000000000100020012002100320101010000101110000001000000000000010001103112000000000000000000000001000000000000000001002101310230030310100101000000000000000220020312301032014200001110000000000000011210300010000000001000200300020011002003200332142210000011001012110000000000000000000121310010100000000000000120200200000000000000000100100020013010211230010000121110000001002010000000000000001012233235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFDYILSLGGTVFVPIIMIVIGLIFRIPWLQAIKAGVTVGIGFVGMGLVIVMAIDSLSPPIKVMIERFGLALHVFDVGAGPASGVGYATAIGAMIIPVIFLLNVAMLVTRLTKTMNVDIYNYWHYAITGTVVQLMTGSLIYGVLGAICHAALSLKMADWTAKRVQNIVGLEGISIPQGYGSSSVPLFVLLDAIYEKIPFMKGRNIDAQEIQKRYGMVGDPVIIGVVLGLIFGLAAGEGFKGCASLMITVAAIMVLFPRMIRLIVEGLLPISDGARKFFQKYFKGREVYIGLDTAVTLGHPTTIAVGLLLIPIMLILASILPGNKVLPLADLPVAPFFICMATVIHRGDLVRTLISGVIVMITVLLIATQFAPYFTEMALKGGFSFAGESAQISALSVGNMFGWSISELMSLGIIGVVVAVGIVASVVLFLRKRELSE
1	SPARKS	2xwub	0.096	0.934	1.049	threading_1	VRTSLAVE-----CGAVFPLLEQLLQQPVLKCFSSWVQLEVPLQDCEALIQAAFAAFDSSVEAIVNAISQ----------PDAQRYVNTLLKLIPLVLGLQEQLRQAVQNGDMETSHGICRIAVALGENHSRALLDQQSFLALVNMIMFCTTSSLTLTFWYTLQDDILSFEAEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDGFWSSDTLMYVYEMLGA-ELLSNLYDKLGRLLTSYSWQHTEALLYGFQSIAETIDDVVPGLIGLIVQLADTVMFTIGALSE----WLADHPVMINGNPEL-SVSSVSTLKKICRE---CKYDLPPY-----AANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIPNPHILGLLSNLFTTLDISPVVVVLQQVFQLIQKVLSKWLN
2	PROSPECT2	1jdha	0.086	0.902	1.928	threading_2	LTKLLNDEDQVVVNQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKS--GGIPALVKMLGSPVDVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTN------VKFLAITTDCLQILAYGNQESKLIILAGPQALVNIKLLWTTSRVLKVLSVCSSNHLTDPSQRLVQNCLWTLRNLSD---AATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLR--AGDREDITEPAICALRHLTSRH------------QEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLNHAPLREQGAIPRLVEEIVEGCTGALHILARDVHNRIVIRGLNT------------------IPLFVQLLYSPIENIQRVAAGVLCELKEAAEAIEAE
3	PPA-I	3g61A1	0.125	0.606	1.167	threading_3	----------------------------------------------------------------------------------------------------------------------------------------------------VSVLTMFR---YAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDS--------FASVGNVSKNSTNMSEADKRAMFAKLEEEMT---TYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMN-------QEIGWFDVHDVGELNTRLTDDVSKINEGI---GDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEG
4	SPARKS	2bkub	0.094	0.897	1.009	threading_4	CLQLFAQNCGNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMD-GPDKVQRTYYVHQALPSILNLMNDQSLQV-----KETTAWCIGRIADSVAELPGVVQACLIGLQLAEATPSPIYNFYPALVDGLIGAANRIDNEFNARASAFSALTTMVATDTVAETSASISTVDENQLTLEDAQSLQELQSNILTVLAAV-----IRKSPSSVEP---------VADMLMGLFFRLLEKKDSAFI------EDDVFYAISALAASLGKGFEKYLETFSPYLLKALN---------------QVDSPVSITAVGFIADISNSL--EEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNI--GADFIPYLNDIMALCVTKPENGTALDYQIKVLEAVLDAYVGIVALHDKPEALFPYVGTIFQFIAQVAEDPQ
5	PROSPECT2	1b3ua	0.084	0.952	1.818	threading_5	LSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGYVHCLLPPLESLATTVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRRAAASKLGEFAKVLELDNVKSEIIPMFSNLDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPAFQNLMKDCEAEVRAHKVKEFCENLSADVIMSQILPCIKELVSDANQHVKSALASVIMGLSNTIEHLLPLFLAQLRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATS--NLKKLVEKFGKEWAHATIIPKVLMTTLFCINVLSEVCGQDITTKHMLP-------------------TVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQ
6	PPA-I	1b3uA	0.058	0.872	1.147	threading_6	LGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLP-QEDLEALVMPTLRQAAED---------KSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDE--------------------CPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEKWRVRLAIIEYMPLLAGQLGV----EFFDEKL---NSLCMAWLVDHVYAIREAATSNLKKLVEKFG-------KEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCQDITTKHMLPTVLRM------------AGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQD
7	PROSPECT2	1w63A	0.083	0.968	1.810	threading_7	MPAPLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSN---------SYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVV-LLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILMNDILAQVATNTETSKNVGNVLTIMDIKSESGLRVLAINILGRFLLNNDLTSLLKTVQTDHNAVQHRSTIVDCLKDLDVSIKRRAMELSFALVNGN----NIRGMMKELLYFLDSCPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIHAYTVQRLYKAILGPLVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLLESVLISNMSTSVTRGYALTAIMKLSVNRIKKK
8	PPA-I	3zuxA	0.146	0.565	1.088	threading_8	-----------------------------------------------------------------------------------------------------------------------------NILSKISSFIGKTFSLWAALFAAAAFFA-----------PDTFKWAGPYIPWLLGIIMFGMGLTL-----------KPSDFDILFKHPK-----VVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCCP----------GGTASNVMTYLARG-------NVALSV---AVTSVSTLTSPLLTPAIFLMLAGEMLEIAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVV------------------GASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGL
9	PROSPECT2	3a6pA1	0.087	0.924	1.799	threading_9	AMD-----QVNALCEQLVKAVTVMMDPNSTQRYRLICVPCGGLQILEHVVKFRWNGMSRLEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKREDMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYID----WVSMSHITA-----ENCKLLEILCLL---LNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQTADGGG-----LVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSN-----FGKYLESFLAFTTHPSQFLRSSTQMTWGALFLLLAIIPKYLRASMTNLVKMGFPSK------TDSPSCEYSRFDGEVMRLACRLDPKTSFQMAGEWLKYQLSTF
10	PPA-I	2jdqB	0.099	0.858	1.082	threading_10	MIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPG----VVARFVEFLKRKENCTLQFESAWV-------------LTNIASGNSLQTRIVIQAGAVPIFIELLSSEF-------EDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSK-----------QNRLTMTRNAVWALSNLCRGK--SPPPEFAKVSPCLNVLSWLL-FVSDTDVLADACWALSYLSDGP--NDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTG-------------------DDIQTQVILNCSALQSLLHLLSSPKE---SIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRN

Predicted Tertiary Structure


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TM-score=0.495 to 2q6hA SCOP code=f.54.1.1	TM-score=0.610 to 1m8xA SCOP code=a.118.1.8	TM-score=0.659 to 1wa5B SCOP code=a.118.1.1	TM-score=0.445 to 1ud0C SCOP code=a.8.4.1	TM-score=0.883 to 1kpkA SCOP code=f.20.1.1