Template-based Modeling Results for SFMF_ECOLI

Submitted Primary Sequence

>Length 171
MRRVLFSCFCGLLWSSSGWAVDPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLALDDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRRVLFSCFCGLLWSSSGWAVDPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLALDDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCEECCCCCCEEEECCCEEHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCEEECCCCCCCEEECCCCEEEEEEEEEEEECCCCCCCEEEEEEEEEEEECC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRRVLFSCFCGLLWSSSGWAVDPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLALDDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN
432100000000000000101132220201020100211020222322120200200121023223222211010202102322000001011122220000222211210000011233220111322222202241201010000020122203201020101010226
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRRVLFSCFCGLLWSSSGWAVDPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLALDDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN
1	MUSTER	2jmrA	0.318	0.865	2.126	threading_1	-----------------------MADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNSAVKVGFTGVADHNANLLALETVSAASGLGIQLLNEQQNQIPLNAPSSATTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
2	SPARKS	3jwne	0.299	0.860	3.904	threading_2	------------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAAVKVGFTGVADSHNANLLANTVSAAAGLGIQLLNEQQNQIPLNAPSSATTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
3	PROSPECT2	3bfqG	0.246	0.760	2.332	threading_3	------------------------------------AKPCTVSTTNAT--VDLGDLYSFSLMSAGAASAWHDVALELTNCPVGRVTASFSGAADSTGYY---KNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS
4	PPA-I	3bfwA	0.227	0.772	2.740	threading_4	------------------------------------AKPCTVSTTNAT--VDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYK-NQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS
5	HHPRED-l	2jty_A	0.293	0.877	4.256	threading_5	-------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNKAAVAFLGTADAGHTNVLASAAGSATNVGVQILDRTGAALTLDGATSSETTLNNGTNTIPFQARYFATG-AATPGAANADATFKVQY-
6	HHPRED-g	2uy6_B	0.187	0.813	4.027	threading_6	---------------------------KVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGV-SKPMDLDIELVNCDITTVKLAFTGPIVNGHSDELDT-NGGTGL-AIVV-QGAGKNVVFDGEGDANT-LKDGENVLHYTAVVKKVGAAVTEGAFSAVANFNLTYQ
7	SP3	3jwne	0.299	0.860	3.954	threading_7	------------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAAVKVGFTGVADSHNANLLENTVSAAAGLGIQLLNEQQNQIPLNAPSSATTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
8	SAM-T99	2jtyA	0.293	0.877	4.800	threading_8	-------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNKAAVAFLGTADAGHTNVLALQSGSATNVGVQILDRTGAALTLGATFSSETTLNNGTNTIPFQARYFATGA-ATPGAANADATFKVQY-
9	MUSTER	2jtyA	0.331	0.883	2.097	threading_9	-------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTSKAAVAFLGTAAGHTNVLALQSSGSATNVGVQILDRTGAALTLDGATFSETTLNNGTNTIPFQARYFATG-AATPGAANADATFKVQYQ
10	SPARKS	3jwng	0.254	0.830	3.617	threading_10	------------------------ADVTITVNGKVVAKPCTVS--TTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTVTASFSGAADSTG---YYKNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.708 to 1klfP SCOP code=b.2.3.2	TM-score=0.801 to 2j2zB SCOP code=b.2.3.2	TM-score=0.692 to 1klfP SCOP code=b.2.3.2	TM-score=0.689 to 1pdkB SCOP code=b.2.3.2	TM-score=0.691 to 1pdkB SCOP code=b.2.3.2