Template-based Modeling Results for RSEA_ECOLI

Submitted Primary Sequence

>Length 216
MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
CCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
443310011122311122002202313300310210000110042321312300001100100332314322221332231233224021122011001200100000000100000011122323233323111121022223111000212232223423232122123202310121111121223323233232332223122222223335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ
1	MUSTER	1or7C	1.000	0.306	1.026	threading_1	MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------
2	PROSPECT2	3bkhA	0.072	0.963	1.028	threading_2	-HHHHHGSLRKGDRGDEQLQTLLNLGNNTFNQVVKFQK-------DNCLDSDGIVGKNTWAELFSKYSPPIPYKTIPPTANKSRAAATPVNAVENATGVRSQLLLTFASIESAFDYEIKAKTSSATGWFQFLTGTWKTIENYGKYGVLTDPTGRPVLKREPTDTDLYLAHFFGPGAARRFPKEAQANPSIFYNKDGSPKTIQEVYNLDGKVAAHRK
3	PROSPECT2	1otvA	0.086	0.917	1.011	threading_3	LSPQAFEEMHNGDATRKQIQGWVAPDAQTRRKWVQRILDHD---GSHGEDGGIEAWLRLGEAVGLS-----RDDLLSERHVLPGVRF--AVDAYLNFARRACWQEAACSSLTELF--------APQIHQSRLDSWPQHYPWIKSQANRDVEHGLALAKAYCDSAEKQNRMLEILQFKLDILWSDAMTMAYALQRPPYHTVTDKAAWHTTRLVLEHH
4	SPARKS	1or7c	1.000	0.306	1.230	threading_4	MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------
5	PROSPECT2	1or7c	1.000	0.306	1.177	threading_5	MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------
6	PPA-I	1or7C	1.000	0.306	1.929	threading_6	MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------
7	HHPRED-l	1or7_C	1.000	0.306	7.058	threading_7	MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------
8	HHPRED-g	1or7_C	1.000	0.306	6.552	threading_8	MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------
9	SP3	1or7c	1.000	0.306	0.507	threading_9	MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------
10	SAM-T99	1or7C	1.000	0.306	4.220	threading_10	MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEE------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.628 to 1or7C SCOP code=a.180.1.1	TM-score=0.470 to 1slyA SCOP code=a.118.5.1	TM-score=0.628 to 1or7C SCOP code=a.180.1.1	TM-score=0.560 to 1otwA SCOP code=a.132.1.4	TM-score=0.628 to 1or7C SCOP code=a.180.1.1