Template-based Modeling Results for RSD_ECOLI

Submitted Primary Sequence

>Length 158
MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
43330231134030012001100220220010003013132143222422330022003000100110001001200230332232220130011023002100201220232221131022023102300300221121112002101221424334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
1	MUSTER	2p7vA	1.000	0.956	3.622	threading_1	MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPG-------NEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
2	SPARKS	2p7va	0.993	0.956	3.566	threading_2	MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGNE-------KALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
3	PROSPECT2	2p7vA	0.993	0.956	2.711	threading_3	MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGNE-------KALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
4	PPA-I	2p7vA	1.000	0.956	5.846	threading_4	MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPG-------NEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
5	HHPRED-l	2p7v_A	1.000	0.949	11.326	threading_5	MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPG-------NEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHP-
6	HHPRED-g	2p7v_A	1.000	0.956	9.750	threading_6	MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPG-------NEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
7	SP3	2p7va	0.993	0.956	6.180	threading_7	MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGNE-------KALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
8	SAM-T99	2p7vA	0.993	0.956	7.398	threading_8	MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGN-------EKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA
9	MUSTER	2q24B	0.134	0.943	0.774	threading_9	FSEELERIAREAGVGSGTLYRNFPTREALIEAAYRNE-CDSVPGLLAELPAEALRAWTRRFIDYA-TAKLGADALRAVVASGGDPYGDSRQLIQSALTALDAAAAA---EIRSDIRSTDFAALAGIALTSSR--PDQRAQAERLLDLVLDGLR--PTA
10	SPARKS	2f07a	0.092	0.968	0.652	threading_10	VISEISDIVKKAGTAQGTFYLYFSSKNALIPAIAENLQIKGRLHGDEDF-WTVLDILIDETFLITER-HKDIIVLCYSGLAIDHSMEKWETIYQPYYSWLEKIINKAIANHEVTEGINSKWTARTIINLVENTAERVEVYKKEIFTFLKRSLGTA---

Predicted Tertiary Structure


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TM-score=0.663 to 1h6gA TM-score=0.998 to native SCOP code=a.24.9.1	TM-score=0.663 to 1h6gA TM-score=0.998 to native SCOP code=a.24.9.1	TM-score=0.662 to 1h6gA TM-score=0.992 to native SCOP code=a.24.9.1	TM-score=0.662 to 1h6gA TM-score=0.992 to native SCOP code=a.24.9.1	TM-score=0.663 to 1h6gA TM-score=0.998 to native SCOP code=a.24.9.1

Experimental Structure

Download 2p7vA

SCOP code=a.24.9.1