Template-based Modeling Results for RPIR_ECOLI

Submitted Primary Sequence

>Length 296
MSQSEFDSALPNGIGLAPYLRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNLRSALEDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAARFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDFFSPGALK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSQSEFDSALPNGIGLAPYLRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNLRSALEDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAARFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDFFSPGALK
CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQSEFDSALPNGIGLAPYLRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNLRSALEDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAARFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDFFSPGALK
55423232223321100210221143013111200200031031003010320042031020000100420303102101100121033233222231224321320022002101310220132022310220030023020000000000100011001101300110000100100010012034100000001113122011002103523020000011230100310100000113223122420101000000000000000211132023103200200221232224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSQSEFDSALPNGIGLAPYLRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNLRSALEDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAARFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDFFSPGALK
1	MUSTER	3fxaA	0.177	0.628	1.503	threading_1	---------------------------------------------------------------------------------------------------DKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNLATASTAVIASFDAVIVCLTYNY----------TKEQFSVIHPGGA-
2	SPARKS	3shoa	0.154	0.615	2.787	threading_2	------------------------------------------------------------------------------------------------------DRQQLPVQVFTNDIENLNQTLNQTQPEAIEAAVEAIRADHVIVV--GGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLIGVSVWRYLRDTVAALAGAAERGVPT-ALTDSSVSPPARIADHVLVAATRGV----GHSLSPVGLIAVVNLLLAEIAVREPERALAVLREVDRLYREQ--G---
3	PROSPECT2	3shoA	0.148	0.615	2.123	threading_3	------------------------------------------------------------------------------------------------------DRQQLPVQVFTNDIENLNQTLNQTQPEAIEAAVEAIRADHVI--VVGGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLIGVSVWRYLRDTVAALAGAAERGVPTA-LTDSSVSPPARIADHVLVAATRG----VGHSLSPVGLIAVVNLLLAEIAVREPERALAVLREVDRLYREQ-----G
4	PPA-I	3fxaA	0.177	0.628	2.477	threading_4	---------------------------------------------------------------------------------------------------DKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNLATASTAVIASFDAVIVCLTYNY----------TKEQFSVIHPGGA-
5	HHPRED-l	3sho_A	0.171	0.611	2.491	threading_5	------------------------------------------------------------------------------------------------------DRQQLPVQVFTNDIENLNQTLNQTQPEAIEAAVEAI-RADHVIVVG-GFSAAVAVFLGHGLNSLGIRTTVLEGGSTLTITLANLRPTDL-IGVSVWRYLRDTVAALAGAAERGVPT-ALTDSSVSPPARIADHVLVAATRGVG----HSLSPVGLIAVVNLLLAEIAVREPERALAVLREVDRLYREQG-----
6	HHPRED-g	3etn_A	0.188	0.595	2.617	threading_6	-----------------------------------------------------------------------------------------------------------IESIQELLQKEAQAVLNIPVTDAYEKAVELIVEQGKLVTSG-GKAGQIA-NIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNPGLKFIVITGNPDSPLASESDVCLSTGHPACTLG-TPTTSTTV-TVIGDILVVQT-KRTEFTIEEYSKR-------HHGGYL-
7	SP3	3fxaa	0.177	0.628	2.762	threading_7	---------------------------------------------------------------------------------------------------DKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNLATASTAVIASFDAVIVCLT----------YNYTKEQFSVIHPGGA-
8	SAM-T99	1vimA	0.167	0.628	2.814	threading_8	---------HGGHMSLLRFLEVVSEH--------------------------------------------------------------------------------------------IKNLRNHIDLETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGE-----TVTPRITDQDVLVGISGSGETTSVVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVVKGKMKQERDEILSQLAPLGTMFELTAMIFLDALVAEIMMQKHLTEKDLEARHA----
9	MUSTER	3shoA	0.165	0.615	1.371	threading_9	-----------------------------------------------------------------------------------------------------DR-QQLPVQVFTNDIENLNQTLNQTQPEAIEAAVEAIR-ADHVIVVG-GFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLIGVSVWRYLRDTVAALAGAAERGVP-TALTDSSVSPPARIADHVLVAATRGV----GHSLSPVGLIAVVNLLLAEIAVREPERALAVLREVDRLYREQ--G---
10	SPARKS	3fxaa	0.177	0.628	2.723	threading_10	---------------------------------------------------------------------------------------------------DKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNLATASTAVIASFDAVIVCLTYNY----------TKEQFSVIHPGGA-

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.668 to 1jeoA SCOP code=c.80.1.3	TM-score=0.668 to 1jeoA SCOP code=c.80.1.3	TM-score=0.644 to 1jeoA SCOP code=c.80.1.3	TM-score=0.639 to 1jeoA SCOP code=c.80.1.3	TM-score=0.668 to 1jeoA SCOP code=c.80.1.3