Template-based Modeling Results for RECQ_ECOLI

Submitted Primary Sequence

>Length 609
MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAHVDGDDEE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAHVDGDDEE
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCEEEECHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAHVDGDDEE
554232231321012002301113312210220020002221000001211120001000000341000000000000210024023221100001132243112200200331301000000220233201210231300000001100002101101120100020143023000000001023201210041020330200101022310101002224212200200341423000000001210220032034320100001010333112201320235311000000011210232100000002016202200210131132222010000012200110220022222011211121101000111212200010002101323331011011022233323022101100100131233111110010021232330331123303211114322231011002100221001222231000100310220132211011222322223332234222131023001202300310043250100000111001200331122121013031112310230031001002210323434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAHVDGDDEE
1	MUSTER	1oyyA	1.000	0.841	3.782	threading_1	MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVA----INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIV---------------------------------------------------------------------------------------------
2	SPARKS	1gkub	0.153	0.947	3.102	threading_2	LCLFPEDFLLKEFVEFFRKCVG--EPRAIQKMWAKRILRKESFAATAPTGVGKTSFGLAMSLFLKGKCYVIFPTSLLVIQAAETIRKYANLIGYYHGRIPKREKENFMQNLR--NFKIVITTTQFLSKH--YRELG--HFDFIFVDDVDAILKASKNVDKLLHLLGFHYDLKARGCLMVSTATAKKGKKAELFRQLLNFDIGSSRITVRN---VEDVAVNDESISTLSSILEKL-GTGGIIYARTGEEAEEIYESLKNK------FRIGIVTATKKGDYEKFVEGEIDHLIGTAHRGLDLPE-RIRFAVFVGCPSDLRTYIQGSGRTSRGGLTKGASFLLDEVDFEKLSRELDESRDRYRRRQEFDLIKPALFIVESPTKARQIS-RFFGKPSVKVLDGAVVYLITNRGFHGKDNSRSRIEALRKLAHDAEAWDLKNLLSGCGTRRAILEALESLRDVDENL-VKAQVVRRIEDRWIGFQKLWERFNNRN-LSATLVLGWIIDRFQESRERRKIAIVRDFDLVLEHDEEEFD----LTIKLVEEREELRTPLPPYT--TETMLSDANRILKFSVKQTMQI----AQELFENGDVGQRIAKEYLGDDFVG
3	SPARKS	2v1xa	0.336	0.821	7.695	threading_3	AWNKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNSELKLIYVTPEKIAKKMFMSRLEKARFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSFIEDIVKLINGYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRISSMVV------MENVGQQKLYEMVSYCQNISCRRVLMAQHFDEVW-ACNKMCDNCCKDSERKNYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGV-------VAPTLPREDLEKIIAHFLIQQYLKEDYATISYLKIGPKANLLNNEAHAITMQVTK-----------------------------------------------------------------------------------------------
4	PROSPECT2	2p6rA	0.185	0.859	2.370	threading_4	MKVEE---LAESISSYAVGILKEEELFPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAEAIKGGKSLYVVPLRALAGEKYESFKKIGLRIGISTGDYESRDEH-------LGDCDIIVTTSEKA-----DSLIRNRAVSCLVVDEIHLLD--SEKRGATLEILVTKMRRMNKALVIGLSATAPNV--TEIAEWLD---ADYYVSDWRPVPLVEGVLCEGVKFEELVEECVA-ENGGVLVFESTRRGAEKTAVKLSAIRKGAAFHHAGLLNGQRRVVEDAFRRGNIKVVVATPTLAAGVNLPARRVIVRYSKRIKVSEYKQMAGRAGRPGMDERGEAII--------------------------------------IVGKRDREIAVKRYIFGEPERITSKLGV------ETHLRFHSLSIICDGYAKTLEELEDFFADTFFFKQN-------------EISLSYELERVVRQLENWGMVVEAAH----LAPTKLGSLVSRLYERLTVRKTDRKELSYYPSDFSVEYDWFLSEVKTALCLKDEICAKYGIAPGDLRRSNAMNRIAEEVGNTLLELVRIRHIGRVRASLIGRGIAERVVEGISVKS--
5	PROSPECT2	2v1xA	0.332	0.821	4.926	threading_5	SSNKEDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNSELKLIYVTPEKIAKSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIEDIVKYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRISSMVVMENV------GQQKLYEMVSYCQISKCRRVLMAQHFDEV-WACNKMCDNCCKDSAFEEYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAG-------VVAPTLPREDLEKIIAHFLIQQYLKEAYATISYLKIGPKANLLNNEAHAITMQVT-----------------------------------------------------------------------------------------------K
6	SP3	1gkub	0.159	0.959	3.006	threading_6	AAASLCLFPEDFLLKEFVEFFCVGEPRAIQKMWAKRILRKESFAATAPTGVGKTSFGLAMSLFLAKRCYVIFPTSLLVIQAAETIRKYANLIGYYHGRIPKREKENFMQNLR--NFKIVITTTQFLSK--HYRELGHF--DFIFVDDVDAILKASKNVDKLLHLLGFHYDGEARGCLMVSTATAKKGKKAELFRQLLNFDIGS-SRITVR-NVEDVAV-NDESISTLSSILEKL-GTGGIIYARTGEEAEEIYESLKNK------FRIGIVTATKKGDYEKFVEGEIDHLIGTAHRGLDLPE-RIRFAVFVGCPSLSPQMVKLLAYLYRNVLPAEVIFLFAEVDFEKLSRELDESRDRYRRRQEFDLIKPALFIVESPTKARQIS-RFFGKPSVKVLDGAVVYLITNRGFHGKDNSRSRIEALRKLAHDAEAWDLKNLLSGCGTRRAILEALESLRDVDENL-VKAQVVRRIEDRWIGFVLERFNNRNLSAGRATLVLGWIIDRFQESRERRKIAIVRDFDLVLEHDEEEFD----LTIKLVEEREELRTPLPPYTT--ETMLSDANRILKFSVKQTMQINGLHRTDSTRVSDVGQRIAKEYLGDDFVG
7	PPA-I	1oyyA	1.000	0.841	7.207	threading_7	MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVA----INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIV---------------------------------------------------------------------------------------------
8	HHPRED-l	1oyw_A	1.000	0.821	4.579	threading_8	-AQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVV-PTGGGKSLCYQIPALLLNGLTVVVSPLISL-KDQVDQLQANGVAAACLNSTQTREQQLEV-TGCRTGQIRLLYIAPERL-LDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPF-ALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRY---EKFKPLDQL-RYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFG-GINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEA-LFYDPAD-AWLRRCLEEKPQGQLQDIERHKLNA-GAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFG-GYVVEVIRGANNQRIRDYGHDKLKVYG-GRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIV---------------------------------------------------------------------------------------------
9	SPARKS	2p6ra	0.173	0.929	2.910	threading_9	---MKVEELAESISSYAVGILKEEELFPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREGGKSLYVVPLRALAGEKYESFKKIGLRIGISTGDYESRDEH-------LGDCDIIVTTSEKADSLIRNRASWIKAVSCLVVDEIHLLDSEKRGA-TLEILVTKMRRMNKALRVIGLSATAPNV--TEIAEWLDAD---YYVSDWRPVPLVEGVLCEGTKFEELVEECVAE-NGGVLVFESTRRGAEKTAVKLSAIRKGAAFHHAGLLNGQRRVVEDAFRRGNIKVVVATPTLAAGVNLPARRVIVRYSKRIKVSEYKQMAGRAGRPGMDEEAIIIVGKRDREIAKRYIFGEPESKLGVETHLRFHSLSIICDGYAKTLEELEDFFADTFFFK-------QNEISLSYELERVVRQLEMVVEAAHLAPTKLGSLVSRLYIDPLTGFIFHDVLS----RMELSDIGALHLICR----------TPDMERLTVRKTDSWVEE---EAFRLRKELSYYPSDFSVEYDWFLSEVKTALCLKDWEDEICAKYGIAPGDLRRSNAMNRIAEEVKEELLELVRIRHIGEKVASLIGRGIAERVVEGISVKS--
10	SP3	2v1xa	0.335	0.819	7.508	threading_10	WNKED-FPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNSELKLIYVTPEKIASKMFMSRLEKARFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSFIEDIVKLINRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRISSMVV------MENVGQQKLYEMVSYCQISKCRRVLMAQHFDEVW-ACNKMCDNCCKDSERKNYCRDLIKILKQAEELNEKLTPLKLIDSWMGKGAAKLRVAGV-------VAPTLPREDLEKIIAHFLIQQYLKEDYATISYLKIGPKANLLNNEAHAITMQVTK-----------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.919 to 1oyyA TM-score=0.998 to native SCOP code=a.4.5.43	TM-score=0.879 to 2p6rA TM-score=0.595 to native SCOP code=a.4.5.43	TM-score=0.917 to 1oyyA TM-score=0.997 to native SCOP code=a.4.5.43	TM-score=0.627 to 1gkuB TM-score=0.475 to native SCOP code=c.37.1.16	TM-score=0.664 to 1oyyA TM-score=0.717 to native SCOP code=a.4.5.43

Experimental Structure

Download 1oyyA

SCOP code=a.4.5.43