Template-based Modeling Results for PRET_ECOLI

Submitted Primary Sequence

>Length 412
MPQQNYLDELTPAFTSLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAHPGGWLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGNTLTLEQLKAENRAVLVTVGLSSGSGLPLFEHSDVEIAVDFLQRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDEFPASEKEFTSARELGVSIIDGFTPVAVEGNKVTFKHVRLSGELTMAADKIILAVGQHARLDAFAELEPQRNTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAEAIHHYLEGACSC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPQQNYLDELTPAFTSLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAHPGGWLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGNTLTLEQLKAENRAVLVTVGLSSGSGLPLFEHSDVEIAVDFLQRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDEFPASEKEFTSARELGVSIIDGFTPVAVEGNKVTFKHVRLSGELTMAADKIILAVGQHARLDAFAELEPQRNTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAEAIHHYLEGACSC
CCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHEECCCCCCCCHHHHHCCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCEECCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEECCCCEEEECCCCEEEEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPQQNYLDELTPAFTSLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAHPGGWLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGNTLTLEQLKAENRAVLVTVGLSSGSGLPLFEHSDVEIAVDFLQRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDEFPASEKEFTSARELGVSIIDGFTPVAVEGNKVTFKHVRLSGELTMAADKIILAVGQHARLDAFAELEPQRNTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAEAIHHYLEGACSC
4543321320032012210030021012042010131010201002003002232030002002320100200011012332012011222231101011001000111232213223323432110000000000010001013210100001322311000101002130222002110210251102010102012102032012202000000001212202223123000001002202223232322110000000000000000032120210100013323312113310220342202001011011022341202202131201020000000002203232123133331102133221322100000101201300010031012002101310322131
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPQQNYLDELTPAFTSLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQRFVTDFEQQTGMEIYQPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAHPGGWLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGNTLTLEQLKAENRAVLVTVGLSSGSGLPLFEHSDVEIAVDFLQRARQAQGDISIPQSALIIGGGDVAMDVASTLKVLGCQAVTCVAREELDEFPASEKEFTSARELGVSIIDGFTPVAVEGNKVTFKHVRLSGELTMAADKIILAVGQHARLDAFAELEPQRNTIKTQNYQTRDPQVFAAGDIVEGDKTVVYAVKTGKEAAEAIHHYLEGACSC
1	MUSTER	2vdcG	0.287	0.990	3.772	threading_1	----QDFAEIYARFSDERANEQANRCSQCGVPFCQVHCPVSNNIPDWLKLTSEGRLEEAYEVSQATNNFPEICGRICPQDRLCEGNCVIEQSHGAVTIGSVEKYINDTAWDQGWVKPRTSRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGRDASLPELRRKHVAVLVATGVYKARKAPGSGLGNIVAALDYLTTSNKVGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIWQAAPEGFTGDGVRAVRIHLGSEFTVQADLVIKALGFEPEDEPELKVTRWGTLLVDHTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKAKAEA
2	SPARKS	2vdcg	0.287	0.990	5.082	threading_2	----QDFAEIYARFSDERANEQANRCSQCGVPFCQVHCPVSNNIPDWLKLTSEGRLEEAYEVSQATNNFPEICGRICPQDRLCEGNCVIEQTHGAVTIGSVEKYINDTAWDQGWVKPRTPSELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGRDASLPELRRKHVAVLVATGVYKARKAPGSGLGNIVAALDYLTTSNKVSLGNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIWQAAPEGFTGDGVRAVRIHLGSEFTVQADLVIKALGFEPEDEPELKVTRWGTLLVDRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKAKAEA
3	PROSPECT2	2vdcG	0.284	0.990	5.424	threading_3	----QDFAEIYARFSDERANEQANRCSQCGVPFCQVHCPVSNNIPDWLKLTSEGRLEEAYEVSQATNNFPEICGRICPQDRLCEGNCVIESTHGAVTIGSVEKYINDTAWDQGWVKPRTSRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGRDASLPELRRKHVAVLVATGVYRDIKAPGSGLGNIVAALDYLTTSNKNGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIWQAAPEGFTGDRIHLGVADATGEFTVQADLVIKALGFEPEDLPNLKVTRWGTLLDHRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKAVAAE
4	PPA-I	2vdcG	0.289	0.990	7.527	threading_4	----QDFAEIYARFSDERANEQANRCSQCGVPFCQVHCPVSNNIPDWLKLTSEGRLEEAYEVSQATNNFPEICGRICPQDRLCEGNCVIEQSHGAVTIGSVEKYINDTAWDQGWVKPRPSRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGRDASLPELRRKHVAVLVATGVYKARKAPGSGLGNIVAALDYLTTSNKNGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIWQAAPEGFTGDGVRAVRIHLGSEFTVQADLVIKALGFEPEDEPELKVTRWGTLLVDRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKAKAEA
5	HHPRED-l	1gte_A	0.311	0.998	4.199	threading_5	EKLENNFDDIHTTLGERGALREAMRCLKCADAPCQKSCPTHLDIKSFITSISNKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEESINIGGLQQFASEVFKAMNIPQIRMPEAYSAKIALLGAGPASISCASFLARLGYSITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSENITLNTLKEEYKAAFIGIGLPEPKTDDITQDQGFYTSKDFLPLVAKSSKLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFDQIVHLKADVVISAFGSVLRDPKVKKFNRWDLPEVDETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYG-
6	HHPRED-g	1gte_A	0.316	1.000	4.375	threading_6	EKLENNFDDIKTTLGERGALREAMRCLKCADAPCQKSCPTHLDIKSFITSISNKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEESINIGGLQQFASEVFKAMNIPQIRMPEAYSAKIALLGAGPASISCASFLARLGYSITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSENITLNTLKEEYKAAFIGIGLPEPDDIFLTQDQGFYTSKDFLPLVAKSSKLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGAVQFVRTDQIVHLKADVVISAFGSVLRDLSPIKFNRWDLPEVDETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGA
7	SP3	2vdcg	0.289	0.990	6.078	threading_7	----QDFAEIYARFSDERANEQANRCSQCGVPFCQVHCPVSNNIPDWLKLTSEGRLEEAYEVSQATNNFPEICGRICPQDRLCEGNCVIEQTHGAVTIGSVEKYINDTAWDQGWVKPRTPRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGRDASLPELRRKHVAVLVATGVYKARKAPGSGLGNIVAALDYLTTSNKVSLLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIWQAAPEGFTGDTVGVRAVRIGSEFTVQADLVIKALGFEPEDEPELKVTRWGTLLVHRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKAKAEA
8	SAM-T99	2vdcG	0.289	0.983	5.420	threading_8	----QDFAEIYARFSDERANEQANRCSQCGVPFCQVHCPVSNNIPDWLKLTSEGRLEEAYEVSQATNNFPEICGRICPQDRLCEGNCVIEQSTHAVTIGSVEKYINDTAWDQGWVKPRTSRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGRDASLPELRRKHVAVLVATGVYKAIKAPGSGLGNIVAALDYLTTSNKNGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREVAHAEEEGVEFIWQAAPEGFTGDGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAKVTRWGTLLVDRTKMTNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKAK---
9	MUSTER	2vdcG1	0.244	0.706	2.600	threading_9	----QDFAEIYARFSDERANEQANRCSQCGVPFCQVHCPVSNNIPDWLKLTSEGRLEEAYEVSQATNNFPEICGRICPQDRLCEGNCVIEQSHGAVTIGSVEKYINDTAWDQGWVKPRTSRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGRDASLPELRRKHVAVLVATGVYKFEDLPNAFDEPELKVTRWGTL--LVDHRTKMTNMDGVFAAGDIGASLVVWAIRDGAAEGIHAYAKAKAEAPVA------AAE-------------------------------------------------------------------------------------------------------------
10	SPARKS	1gtea	0.311	1.000	4.340	threading_10	EKLENNFDDIKHTLGERGALREAMRCLKCADAPCQKSCPTHLDIKSFITSISNKNYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEGSINIGGLQQFASEVFKAMNIPQIRNPEAYSAKIALLGAGPASISCASFLARLGYSITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSEEITLNTLKEGYKAAFIGIGLPEPKTDGLTQDQGFYTSKDFLPLVAKSSKAPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFDQIVHLKADVVISAFGSVLRDPSPIKFNRWDLPEVDETMQTSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQAQYGA

Predicted Tertiary Structure


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TM-score=0.766 to 1h7wD SCOP code=a.1.2.2	TM-score=0.763 to 1h7wD SCOP code=a.1.2.2	TM-score=0.764 to 1h7wD SCOP code=a.1.2.2	TM-score=0.767 to 1h7wD SCOP code=a.1.2.2	TM-score=0.766 to 1h7wD SCOP code=a.1.2.2