Template-based Modeling Results for PHNL_ECOLI

Submitted Primary Sequence

>Length 226
MINVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGASS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MINVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGASS
CEEEEEEEEEEECCCCCCEEEEEECCCEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MINVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGASS
3110220110022333421201002400020230100001021210100003001002203202000222332110220223101200323000001001001301001000000112213431002101300330203321222211201211111010010011311000011011101230011002002203432100000001320132002100111335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MINVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGASS
1	MUSTER	2pclA	0.319	0.942	3.947	threading_1	ILRAENIKKVIR-------GYEILKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEG----KEVDYTNEKELSLLRNRKLGFVFQFHYLIPELTALENVIVPMLKMGKPKKEAKERGEYLLSELGLGDKLSR-KPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKINEGGTSIVMVTHERELAELTHRTLEMKDG-G
2	SPARKS	1l2ta	0.311	0.969	4.561	threading_2	MIKLKNVTKTYK---MGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNI----KTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEGKTVVVVTHDINVARFGERIIYLKDGEV
3	PROSPECT2	1l2ta	0.317	0.965	4.772	threading_3	MIKLKNVTKTYK---MGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNI----KTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEGKTVVVVTHDINVARF-GERIIYLKDGR
4	PPA-I	2pclA	0.318	0.947	5.831	threading_4	ILRAENIKKVIRG-------YEILKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEG----KEVDYTNEKELSLLRNRKLGFVFQFHYLIPELTALENVIVPMLKMGKPKKEAKERGEYLLSELGLGDKLSR-KPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKINEGGTSIVMVTHERELAELTHRTLEMKDGKV
5	HHPRED-l	1l2t_A	0.318	0.960	2.347	threading_5	MIKLKNVTKTYKMG---EEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDN----IKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEDGKTVVVVTHDINVA-RFGERIIYLKDG-
6	HHPRED-g	1l2t_A	0.311	0.969	2.194	threading_6	MIKLKNVTKTYKM---GEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNI----KTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEGKTVVVVTHDINVARFGERIIYLKDGEV
7	SP3	1l2ta	0.311	0.969	4.536	threading_7	MIKLKNVTKTYK---MGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNI----KTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEGKTVVVVTHDINVARFGERIIYLKDGEK
8	SAM-T99	2pclA	0.324	0.942	2.956	threading_8	ILRAENIKKVI-------RGYEILKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEGK----EVDYTNEKELSLLRNRKLGFVFQFHYLIPELTALENVIVPMLKMGKPKKEAKERGEYLLSELGLGDKLSR-KPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKINEGGTSIVMVTHERELAE-LTHRTLEMVGEI
9	MUSTER	1f3oA	0.315	0.942	3.688	threading_9	-IKLKNVTKTYK----GEEIIYALKNVNLNIKEGEFVSI--PSGSGKSTL-NIIGCLDKPTEGEVYIDN----IKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKGASGEERRKRALECLKAELEERFANH-KPNQLSGGQQQRVAIARALANNPPIILADEPTGALDSKTGEKIQLLKKLNEEDGKTVVVVTHDINVARFGERIIYLKDGER
10	SPARKS	1b0ua	0.275	0.965	3.830	threading_10	KLHVIDLHKRY-----GG--HEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKADKNQLRLLRTR-LTMVFQHFNLWSHMTVLENVEAPIQVLGLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGK

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.902 to 1f3oA SCOP code=c.37.1.12	TM-score=0.891 to 1f3oA SCOP code=c.37.1.12	TM-score=0.851 to 1f3oA SCOP code=c.37.1.12	TM-score=0.847 to 1f3oA SCOP code=c.37.1.12	TM-score=0.901 to 1f3oA SCOP code=c.37.1.12