Template-based Modeling Results for PERR_ECOLI

Submitted Primary Sequence

>Length 297
MKLLAKAPLNLLRAFEAAGRTGAFALAASELELSPSAISHAIRKLENLLDVRLFQRSTREITLTKEGEILLEHIQRGFNELQQGLALVTADESRPLRLHTAPSFAHQWLLPRLGKFIRENPSIDLRLSASTEYARFEQDDFDLDIVYGEPRPSPYEKIPLAVEELTPLCSPQLAERLKKPEDLYALTLIQCDVQLYQWKGWFEANKMTPPNNYGLRFDRSFMAIAAAVDGLGVVLESKLLAEREIASGKLVCPLVNSTSEIHYIGHYLVFPQHQHMHSALDVFKTWLLNELNLGKIR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLLAKAPLNLLRAFEAAGRTGAFALAASELELSPSAISHAIRKLENLLDVRLFQRSTREITLTKEGEILLEHIQRGFNELQQGLALVTADESRPLRLHTAPSFAHQWLLPRLGKFIRENPSIDLRLSASTEYARFEQDDFDLDIVYGEPRPSPYEKIPLAVEELTPLCSPQLAERLKKPEDLYALTLIQCDVQLYQWKGWFEANKMTPPNNYGLRFDRSFMAIAAAVDGLGVVLESKLLAEREIASGKLVCPLVNSTSEIHYIGHYLVFPQHQHMHSALDVFKTWLLNELNLGKIR
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEECCHHHHCCCCCHHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLLAKAPLNLLRAFEAAGRTGAFALAASELELSPSAISHAIRKLENLLDVRLFQRSTREITLTKEGEILLEHIQRGFNELQQGLALVTADESRPLRLHTAPSFAHQWLLPRLGKFIRENPSIDLRLSASTEYARFEQDDFDLDIVYGEPRPSPYEKIPLAVEELTPLCSPQLAERLKKPEDLYALTLIQCDVQLYQWKGWFEANKMTPPNNYGLRFDRSFMAIAAAVDGLGVVLESKLLAEREIASGKLVCPLVNSTSEIHYIGHYLVFPQHQHMHSALDVFKTWLLNELNLGKIR
552222010100100100031000110032011011001200340042030300112121010032022003102400220230022023332210101000000000000000300440120100000113214133330000000021302201011002120000000300340320210230100113121220100041140212322001013010000001201000001110012103202001102221231321000000142332121020002001311322335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKLLAKAPLNLLRAFEAAGRTGAFALAASELELSPSAISHAIRKLENLLDVRLFQRSTREITLTKEGEILLEHIQRGFNELQQGLALVTADESRPLRLHTAPSFAHQWLLPRLGKFIRENPSIDLRLSASTEYARFEQDDFDLDIVYGEPRPSPYEKIPLAVEELTPLCSPQLAERLKKPEDLYALTLIQCDVQLYQWKGWFEANKMTPPNNYGLRFDRSFMAIAAAVDGLGVVLESKLLAEREIASGKLVCPLVNSTSEIHYIGHYLVFPQHQHMHSALDVFKTWLLNELNLGKIR
1	MUSTER	3ispA	0.160	0.946	2.519	threading_1	L------DGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVR-EKPCRATTAGIPLLRLAAQTALLESEALAEMGASLKRRITIAVNADSMATWFSAVFDGLGDVLLDVRIED--QDHSARLLREGAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQRGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEKLAASPLADGSFVRVCDIHLDVP---LYWQCW---KLDSPIIARITDTVRAAASG-LYR
2	SPARKS	3kosa	0.249	0.650	4.502	threading_2	--------------------------------------------------------------------------------------------QEKLKIGVVGTFAIGCLFPLLSDFKRSYPHIDLHISTHNNRVDPAAEGLDYTIRYGGGAWHDTDAQYLCSA-LSPLCSPTLASQIQTPADILKFPLLRS-YRRDEWALWQTVGEAPPSPTHNVVFDSS-VTLEAAQAG-GVAIAP-VRFTHLLSSERIVQPFLTQIDL---GSYWITRLQSRPETP-AREFSRWLTGVLHKT---
3	PROSPECT2	3fxqA	0.188	0.949	3.161	threading_3	LK------LQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEQLRGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPDGTLDFALTAAHDIDTDLEAQPLYVSDVVIVGQRQHMANATRLAELQECRWAAPRGPGAIIRNAFARYGLPEPKLG-LVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSPLQDALP---NPTIYVLRRHDLPVTPAAAGLIRWIQHHA-----L
4	PPA-I	3ispA	0.148	0.956	5.757	threading_4	-----QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVR-EKPCRATTAGIPLLRLAAQTALLESEALAEMGASLKRRITIAVNADSMATWFSAVFDGLGDVLLDVRIEDQDHSARL-LREGVAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEKLAASPLADGSFVRVCDIHL------DVPLYWQCWKLDSPIIARITDTVRAAASGLYRG
5	HHPRED-l	3hhg_A	0.235	0.960	3.433	threading_5	-----KTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAIPQGVLSVDSAMPMVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLFDSRFRVIASPEYLAKHQSTEELAGHQCLGFTEPGSLNTWAVLAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLEQTS--DKTHPFNAVYYSDKAVNLRLRVFLDFLVEELG-----
6	HHPRED-g	3szp_A	0.185	0.946	2.835	threading_6	------MKLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDRGSGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHIELMMSNQADDLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASPQYLPQPTHAEELHQHQLL-KGYPLLKWQNSQGETVVN--SDGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWS--SNPRDIYMLYNHKDHQPEKVRLFIDFVIGYHL-----
7	SP3	3ispa	0.163	0.953	4.509	threading_7	----QL-DGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVR-EKPCRATTAGIPLLRLAAQTALLESEALAEMGASLKRRITIAVNADSMATWFSAVFDGLGDVLL--DVRIEDQDHSARLLREGVMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEKLAASPLADGSFVRVCDIHL------DVPLYWQCWKLDSPIIARITDTVRAAASGLYRG
8	SAM-T99	3hhgE	0.238	0.963	4.280	threading_8	----MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLEIPQGVLSVDSAMPMVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLFDSRFRVIASPEYLAKPQSTEELAGHQCLGF-TEPGSLNTWAVLDAQGNKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTS-DKTHPFNAVYYSDKAVNLRLRVFLDFLVEELG-----
9	MUSTER	3kosA	0.249	0.650	2.231	threading_9	--------------------------------------------------------------------------------------------QEKLKIGVVGTFAIGCLFPLLSDFKRSYPHIDLHISTHNNRVDPAAEGLDYTIRYGGGAWHDTDAQYLCSA-LSPLCSPTLASQIQTPADILKFPLLRS-YRRDEWALWQTVGEAPPSPTHNVVFDSS-VTLEAAQAG-GVAIAP-VRFTHLLSSERIVQPFLTQIDL---GSYWITRLQSRPETP-AREFSRWLTGVLHKT---
10	SPARKS	3ispa	0.163	0.953	4.341	threading_10	----QL-DGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVR-EKPCRATTAGIPLLRLAAQTALLESEALAEMGASLKRRITIAVNADSMATWFSAVFDGLGDVLL--DVRIEDQDHSARLLREGAMGAVTTERNPVPGCRVHPLGEMRYLPVASRPFVQDGFTAAAAAKAPSLAWNRDDGLQDMLVRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEKLAASPLADGSFVRVCDIHL------DVPLYWQCWKLDSPIIARITDTVRAAASGLYRG

Predicted Tertiary Structure


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TM-score=0.638 to 2esnC SCOP code=a.4.5.37	TM-score=0.634 to 2esnC SCOP code=a.4.5.37	TM-score=0.625 to 1amfA SCOP code=c.94.1.1	TM-score=0.635 to 2esnC SCOP code=a.4.5.37	TM-score=0.644 to 2esnC SCOP code=a.4.5.37