Template-based Modeling Results for OPPD_ECOLI

Submitted Primary Sequence

>Length 337
MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLVVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTPGRLRACFKPVEELL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLVVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTPGRLRACFKPVEELL
CCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCEEEECCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCEECCCCCHHHHHHHHCCCEEEEECCCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEECCCCEEEEEECCHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLVVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTPGRLRACFKPVEELL
5532322222223442320020210201020331302002400010331100000021211200000001000222020101000212201302331004022310000012001100110210210010012134122220021003002204022033013301110110000000000001030200001101000001000100200220153140000000000000010011000000010012020310122111100100030013132323202202111121231140010111021003103422212313311000001113223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLVVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTPGRLRACFKPVEELL
1	MUSTER	3dhwC	0.279	0.905	1.987	threading_1	------------------MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---EGSVLVDGQELTTLSESELTKAR-RQIGMIFQ----NLLSSRTVFGNVALPLEL--NTPKDEVKRRVTELLSLVGLGD---KHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPTGQSVDAPLLSETARRFNVNN-MDYAGGVKLTEMHGTQQDTQ
2	SPARKS	1b0ua	0.294	0.736	4.106	threading_2	-----------------NKLHVIDLHKRY----GGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSE---GAIIVNGQNINVADKNQLRLLR-TRLTMVFQHF--NLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGID--ERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEE-GKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQVFGNPQSPRLQQFLKGSLKKLEH-----------------------------------------------------------
3	PROSPECT2	2d3wA	0.283	0.703	3.372	threading_3	M------------------LSIKDLHVSV----EDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGR-EDYEVTGGTVEFKGKDLLALSPEDR---AGEGIFMAFQYPV--EIPGVSNQFFLQTALNAVRTLDRFDFQDLMEEKIALLKMPE-DLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLRDG-KRSFIIVTHYQRILDYIPDYVHVLYQGRIVKSGDFTLVKQLEEQGYGW----------------------------------------------------------------------L
4	PPA-I	2zu0C	0.267	0.712	4.003	threading_4	------------------MLSIKDLHVSVED----KAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGR-EDYEVTGGTVEFKGKDLLALSPEDRAGEG---IFMAFQYPV--EIPGVSNQFFLQTALNAVRSLDRFDFQDLMEEKIALLKMPE-DLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLRDG-KRSFIIVTHYQRILDYIPDYVHVLYQGRIVKSGDFTLVKQLEEQGYG--------WLTEQ-----------------------------------------------------------
5	HHPRED-l	1b0u_A	0.300	0.733	2.553	threading_5	-----------------NKLHVIDLHKRY----GGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGAIIVNGQNINLVDKNQLRLLR-TRLTMVFQHF--NLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGID--ERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEE-GKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQVFGNPQSPRLQQFLKGSLKLEH------------------------------------------------------------
6	HHPRED-g	1b0u_A	0.290	0.736	2.475	threading_6	-----------------NKLHVIDLHKRY----GGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSE---GAIIVNGQNINLVRDKNQLRLLRTRLTMVFQHF--NLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGID--ERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEE-GKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQVFGNPQSPRLQQFLKGLKKLEH------------------------------------------------------------
7	SP3	1b0ua	0.294	0.736	3.958	threading_7	-----------------NKLHVIDLHKRY----GGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSE---GAIIVNGQNINVADKNQLRLLR-TRLTMVFQHF--NLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGID--ERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEE-GKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQVFGNPQSPRLQQFLKGSLKKLEH-----------------------------------------------------------
8	SAM-T99	3dhwC	0.293	0.881	2.903	threading_8	------------------MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP---TEGSVLVDGQELTTLSESELTKAR-RQIGMIFQH--FNLLSSRTVFGNVALPLELD-NTPKDEVKRRVTELLSLVGLGD---KHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLD------------PEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIIS
9	MUSTER	3gfoA	0.316	0.733	1.985	threading_9	---------------EDYILKVEELNYNY--SDGT-HALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPS---SGRILFDNKPI-DYSRKGIMKLR-ESIGIVFQDPDNQL----SVYQDVSFGAVN-MKLPEDEIRKRVDNALKRTGIEHLKDK---PTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAEKE--VIRKVNLRLPRI-----HLMEI----------------------------------------------------
10	SPARKS	3dhwc	0.283	0.902	3.906	threading_10	------------------MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---EGSVLVDGQELTTLSESELTKAR-RQIGMIFQH--FNLLSSRTVFGNVALPLEL-DNTPKDEVKRRVTELLSLVGLGD---KHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPFTGQ--SVDAPLLSETARRFNVNNNIISAQMD---YAGGVKF

Predicted Tertiary Structure


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TM-score=0.785 to 1f3oA SCOP code=c.37.1.12	TM-score=0.785 to 1f3oA SCOP code=c.37.1.12	TM-score=0.845 to 1b0uA SCOP code=c.37.1.12	TM-score=0.690 to 1g6hA SCOP code=c.37.1.12	TM-score=0.724 to 1ji0A SCOP code=c.37.1.12