Template-based Modeling Results for NRFE_ECOLI

Submitted Primary Sequence

>Length 552
MLTPLTAFAGVRLRWPAMMRLTCIGILAQFALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLWVLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEGRDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDGACARICWRWALPGWSALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFCHWSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGWRARDGGPAVHFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPYFNRATLPFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGVVVSSVSRQEISLNLQPGQQVTLAGYTFRFECLDLQAKGNYTSEKAIVALFDHQQRIGELTPERRFYEARRQQMMEPSIRWNGIHDWYAVMGEKTGPDRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWRGKKRDE
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLTPLTAFAGVRLRWPAMMRLTCIGILAQFALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLWVLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEGRDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDGACARICWRWALPGWSALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFCHWSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGWRARDGGPAVHFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPYFNRATLPFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGVVVSSVSRQEISLNLQPGQQVTLAGYTFRFECLDLQAKGNYTSEKAIVALFDHQQRIGELTPERRFYEARRQQMMEPSIRWNGIHDWYAVMGEKTGPDRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWRGKKRDE
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCEEEECCEEEEEEEEEECCCCCEEEEEEEEEEEECCEEEEEEEHHHHHCCCCCCCCCHHHHHCCCCCHHEEECCEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLTPLTAFAGVRLRWPAMMRLTCIGILAQFALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLWVLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEGRDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDGACARICWRWALPGWSALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFCHWSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGWRARDGGPAVHFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPYFNRATLPFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGVVVSSVSRQEISLNLQPGQQVTLAGYTFRFECLDLQAKGNYTSEKAIVALFDHQQRIGELTPERRFYEARRQQMMEPSIRWNGIHDWYAVMGEKTGPDRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWRGKKRDE
321100110113121200110000000000000000000000000011000000011112211100100000111200000000000000000012133223200000000000000000000001111112012112213311111210000000000000000000000000000021312010020011001000000000000001000022011000010010000000000000000010023221200000000000000000000000210101211011223221100000000000000001013243223222221212200000010000000000000000100001012130111011112000000000000000010020122100100000000000000001101311100202212102022010101101222312120110101002342200201011211313323001000211001100000012133220000000100010000000000000000023244444
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLTPLTAFAGVRLRWPAMMRLTCIGILAQFALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLWVLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEGRDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDGACARICWRWALPGWSALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFCHWSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGWRARDGGPAVHFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPYFNRATLPFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGVVVSSVSRQEISLNLQPGQQVTLAGYTFRFECLDLQAKGNYTSEKAIVALFDHQQRIGELTPERRFYEARRQQMMEPSIRWNGIHDWYAVMGEKTGPDRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWRGKKRDE
1	SPARKS	2xwub	0.111	0.917	1.018	threading_1	LKAQLFTQITRFASGS-------KIVLTRLCVALASLALSMMPDAWPCA-VADMVRLFQAPVD-------------GQGRCLALLELLTVLPEEFQTSRLPQYRKGLVRTSLAVCGAVFPLLEQLLQQPSSKVLKCFSSWVQLEVPLQDCEALIQAAFAALQDSELFDSSVEAIVNAISQPRYVNTLLKLIPLVLGLQEQLRQAVQNG----------------DMETSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFSFEAEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSYSWQHTEALLYGFQSIADVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVALGNPELSVSSVSTLKKRECKYDLPPYAANIVAVSDVLMKQQCMWLMQALGFLLSALQVEEILKNLHS-LISPYIQQLEKLAEEI--------PNPSNKLAIVHILGLLSNLFTTLDISHPNP
2	PROSPECT2	3a6pA1	0.099	0.750	2.101	threading_2	LCEQLVKAVTVMMDPEEFKEKCPICVPCGLRLVRHFGLQILEHVVKFRWNMELIANGTL-------------NILEEENHIKDALSRIVVEMIKREWPQHWPDMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQ-TLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLA-----------------GYIDWVSMSHITLLEILCLAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQT----------ADGGGLVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFRHEILS-RDPLLLAIIPKYLRASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNSSRAQ--------------------------------------------------------------------------QGEV----------------------MRLACRLDPKTSFQMAGEWLKYQLSTF
3	PROSPECT2	1b3ua	0.105	0.859	2.045	threading_3	TRSELLPFLTDTIYDEDEVLLALAEQLGTFTYVHCLLPPLESLATVEETVVRDKAVES------LRAISHEHSPSDLEAHFVPLVKRLACGLFSVCYPRVSSAVKAELRQYFRNLAAASKLGEFAKVLELDNVKSEIIPMSDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDC---EAEVRAAASHKVKEFCILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIIVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHV-----YAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMYLHRMTTLFCINVLSEVCGQDITTKHM--------------------------------------------LPTVLRMAGDPVANVRFNVAK--SLQKIGPILD------------------NSTLQSEVKPILEKLTQDQDVDVKYF
4	PROSPECT2	1jdha	0.090	0.783	2.041	threading_4	VNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQCTAGTLHNLSHHREGLLAIFKSG-GIPALVKM-----LGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQVKFLAITTDCLQILAYGNQESK-----------LIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA---------------GDREDITEPAICALRHLEMAQNAVRLHYGLPVVVKLLHPPSHWPL-----IKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR--------------------------------------------------------------VAAGVLCELAQDKEA---------------------AEAIEAEGATAPLTELLHSRNEGVATY
5	PROSPECT2	1qgra	0.107	0.998	2.037	threading_5	MLVELSRVLSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLHTLGTETYACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMELFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILAAGVCLMLLATCCEDDIVPHVDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYRSSAYESLMEIVKYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLVMASLLRMFSGGVQEDALMAVSTLVEVLGGEFLKYMEAGIGLKNYAEYQVCLAAVGLVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGQQASQAQVDKSDYDMVDYLNYTGIVQGLKGDQENVHPDVM-LVQPRVEFILVACAAGLIGDLCTAFGKDVNQA
6	PROSPECT2	2bkuB	0.089	1.000	1.942	threading_6	FAGLSSQVLIDENTKLEGRILAALTLTQQFAQRWIQIKTNALTALVSIIAAIADIELPHGAWPELMKIMVDNTGAEQPENVKRASLLALGYMCESADALVSSSNNILIAIVQGAVRLAALNALADSLIFIKNNMEREGERNYLMQVVAEDIEVQAAAFGCLCKIMSKYYLYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPIYNFNRIDNEFNARASAFSALTTMVSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVPSSVEPVADMLMGLFFRLDDVFYAISALAASLGKGFEKYALNQVDSSNSLEEDFRLAQMISNPNARRELKPAVLSVADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKDAYVGIVAGLHDKPEALFPYVGTIFQFIASRAAVGLIGDIAAMFPDGSIKQ
7	MUSTER	3orgA	0.150	0.855	0.891	threading_7	-------------------SLMYLLRLVCFLTLLGVTAALFIFAV--DLAVHGLEE---------LRMKISRAGRFAGYILYVVSGVALCLLSTFWCAVLSTEAE--LPQMKSILSG------------FYDKMRSALELRVL--FAKALGLICAIGGLPVGWEGPNVHIACIIAHQFYGVFKELCTRALRLQTLAAACAVGLASSFGGGVLYSIETIASFYL------QAFWKGVLSALSGAIVYELDVSRT---QTLLYAILGALMGVLGALFIR--CVRSIYELRMRHYPGTNRYFLVGVVALFASALQY--FPRATINDLFKAVTELILMPIIKFILVALSIGLPAGVFVPSFLIGAGFGRL-YGE-LMRVVFVPGSYAVVGAAAFTAGVTRALSCAVIIFEVTGLVPVLISVLLAVIYETLVLMKMHPIEGEPHLFPDSEPQHIKGIKFPNRL----VFPVIDANGYLLGAISRKEIVDRLQHVVV-----PCDVSPIVVTSYSLVRQ---LHFLFVMLMPSMI--GKLV----GIVEREDYGYSN-
8	SPARKS	3m1ic	0.092	0.886	0.938	threading_8	IRNFVVGMIISMCQDDEVFKTQ-KNLINKSDLTLVQILKQEWPQNWPEF-IPELIGSSSS-------------SVNVCENNMIVLKLLSEEVFDFSAEQMTLHLKNSMSKEFEQIFKLCFQVLEQGSSSTLESLLRYLHWIPYRYIYETNILELLS-TKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIAVTADLKATYANANG-----NDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEERELFKTTLDYWHNLVYEPLKKHIYEEICSQLRLVIIENMVRVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLVIDTEEIMISKL--ARQIDGSEWSWHNINTLSWAIGSISG-----TMSEDTEKRFVVTVIKDLLDL---TVKKRGKDNKAVVASDIMYVVGQY------------PRF--------LKAHWNFLTVILKLFEFMHETHEGVQDMACDTKIVQKCKYHFVIQQPRES-------EPF-----IQTIIRDIQKTTADLQPQQVHT
9	PROSPECT2	3a0oA	0.090	0.864	1.925	threading_9	QLSAFADAVAKDPNHCGWAEFYQMYIDCQEVIYAIRHLAIAGRVLGRDASRKWLLAVAAWDTKG-------ATSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHVFPYD--------------------------SHAVRSLSAVLTPACIALQGESDEA----GEWLDYTVEFLATLYSPW-------AGTDGGWAEGPHYWMTGMAYLIEAANLIRSYIGYD------LYQRPFFQNTGRFPLYTKAPGTRRANFGDDSTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHDYPQVEAVSPADLPALAVFDDIGWAKDMEDPDRHLQFVFKSSPYGSLYYVAFNSQMHLNWRRQTRSDKALARRAAGRIVSVEEQPGHVRIVGDAEVECSEPQELQLGAPQTGRSSFRYNGRKAGFYGQF----VYSSGGTPQISPKEFEGLDIHHHVCATIDDQGFSTDIYFSDVD---------------------DERFKPK
10	PPA-I	3l1lA	0.120	0.650	0.961	threading_10	GLSMVYAKMSFLDPGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSY-----------------------FFPILKDPWVLTITCVVVLWIFVLLNIVG--PKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMA---------------------AIQSTLNVTLWSFESASVAAGVVKN-PKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNA-----ALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPI--FARVNKAGTPVAGLIIVGILMTIFQLS-------------SISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKA-----RPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDA-------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.735 to 1kpkA SCOP code=f.20.1.1	TM-score=0.559 to 1xm9A SCOP code=a.118.1.24	TM-score=0.537 to 1ialA SCOP code=a.118.1.1	TM-score=0.508 to 2q6hA SCOP code=f.54.1.1	TM-score=0.727 to 1b3uA SCOP code=a.118.1.2