Template-based Modeling Results for NLPE_ECOLI


  Submitted Primary Sequence

>Length 236
MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQSWRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEAAQSSLPMTPMTLRGMYFYMADAATFTDCATGKRFMVANNAELERSYLAARGHSEKPVLLSVEGHFTLEGNPDTGAPTKVLAPDTAGKFYPNQDCSSLGQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQSWRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEAAQSSLPMTPMTLRGMYFYMADAATFTDCATGKRFMVANNAELERSYLAARGHSEKPVLLSVEGHFTLEGNPDTGAPTKVLAPDTAGKFYPNQDCSSLGQ
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCEEEEECCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQSWRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEAAQSSLPMTPMTLRGMYFYMADAATFTDCATGKRFMVANNAELERSYLAARGHSEKPVLLSVEGHFTLEGNPDTGAPTKVLAPDTAGKFYPNQDCSSLGQ
42120000000000000000033423232222232231321220020000002040010100025211120111112244432212110101122220011234222010202110010014313313231212022132212211000100001112000011033122010122020120002122333110002020001020123322211000012213113332122225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQSWRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEAAQSSLPMTPMTLRGMYFYMADAATFTDCATGKRFMVANNAELERSYLAARGHSEKPVLLSVEGHFTLEGNPDTGAPTKVLAPDTAGKFYPNQDCSSLGQ
1MUSTER2z4iB0.9250.7882.828threading_1-----------------------------------------PQSWRGVLPCADCEGIETSLFLEKDGTWVNERYL-GAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGD-ALELDREGNPIESQFNYTLEAAQSSLPTP--TLRGYF--YADAATFTDCATGKRFV-ANNAELERSYLAARGHSEKPVLLSVEGHFTLEGNPDTGAPTKVLAPDTAGKFYPNQDCSSL--
2SPARKS2z4ha0.9790.8056.606threading_2----------------------------------------MPQSWRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEAAQSSLPMTPMTLRGMYFYMADAATFTDCATGKRFMVANNAELERSYLAARGHSEKPVLLSVEGHFTL----EGNPPTKVLAPDTAGKFYPNQDCSSL--
3PROSPECT22z4hA0.9790.8053.632threading_3M----------------------------------------PQSWRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEAAQSSLPMTPMTLRGMYFYMADAATFTDCATGKRFMVANNAELERSYLAARGHSEKPVLLSVEGHFTL----EGNPPTKVLAPDTAGKFYPNQDCSSL--
4PPA-I2z4iB0.9250.7885.304threading_4-----------------------------------------PQSWRGVLPCADCEGIETSLFLEKDGTWVNERYL-GAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGD-ALELDREGNPIESQFNYTLEAAQSSLPTP--TLRGYF--YADAATFTDCATGKRFV-ANNAELERSYLAARGHSEKPVLLSVEGHFTLEGNPDTGAPTKVLAPDTAGKFYPNQDCSSL--
5HHPRED-l2z4i_A1.0000.76711.303threading_5-----------------------------------------PQSWRGVLPCADCEGIETSLFLEKDGTWV-NERYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALE-LDREGNPIESQFNYTLEAAQSSLP-TP-TLRG-YFY-ADAATFTDCATGKRF-VANNAELERSYLAARGHSEKPVLLSVEGHFTLEGNP-----TKVLAPDTAGKFYPNQDCSSL--
6HHPRED-g2z4i_A1.0000.76710.031threading_6-----------------------------------------PQSWRGVLPCADCEGIETSLFLEKDGTWV-NERYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALE-LDREGNPIESQFNYTLEAAQSSLP-TP-TLRG-YFY-ADAATFTDCATGKRF-VANNAELERSYLAARGHSEKPVLLSVEGHFTLEGNP-----TKVLAPDTAGKFYPNQDCSSL--
7SP32z4ha0.9790.8056.088threading_7----------------------------------------MPQSWRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEAAQSSLPMTPMTLRGMYFYMADAATFTDCATGKRFMVANNAELERSYLAARGHSEKPVLLSVEGHFTL----EGNPPTKVLAPDTAGKFYPNQDCSSL--
8SAM-T992z4iB0.9460.7886.049threading_8-----------------------------------------PQSWRGVLPCADCEGIETSLFLEKDGTWV-NERYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALE-LDREGNPIESQFNYTLEAAQSSLPTPTLRG----YFYADAATFTDCATGKRFV-ANNAELERSYLAARGHSEKPVLLSVEGHFTLEGNPDTGAPTKVLAPDTAGKFYPNQDCSSL--
9MUSTER2z4iB10.9200.4241.278threading_9-----------------------------------------PQSWRGVLPCADCEGIETSLFLEKDGTWVNERYL-GAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGD-ALELDREGNPIESQFNYTLEAAQSSLP---------------------------------------------------------------------------------------------
10SPARKS3lhna0.3170.4412.782threading_10------------------------------LGDTSQNALDWPGVYEGVLPCASCEGIQTTLTLQADNSFELKSIYLGKDESIFKVAGKFDWDSNGSKITLSDGS----KYLVGEN-QLLLDTEGNRITGGLHYILKKKG-------------------------------------------------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.451 to 1jjuA
TM-score=0.714 to native
SCOP code=a.3.1.7		 TM-score=0.445 to 1jmxA
TM-score=0.742 to native
SCOP code=a.3.1.7		 TM-score=0.429 to 2eifA
TM-score=0.473 to native
SCOP code=b.34.5.2		 TM-score=0.430 to 2eifA
TM-score=0.462 to native
SCOP code=b.34.5.2		 TM-score=0.451 to 1jjuA
TM-score=0.714 to native
SCOP code=a.3.1.7

  Experimental Structure

Download 2z4hB
SCOP code=a.3.1.7