Template-based Modeling Results for MPRA_ECOLI

Submitted Primary Sequence

>Length 176
MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLSRLDQMEQDGVVLEAMS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLSRLDQMEQDGVVLEAMS
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLSRLDQMEQDGVVLEAMS
55332122220021113424312221010010012002201310231043220221100000002123332021120011010131101200210252110212213422200001003301300220131022002301320222113202300220022024134321223125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLSRLDQMEQDGVVLEAMS
1	MUSTER	2fbkA	0.226	0.881	2.261	threading_1	--DTAALLERIRSDWARLNHGPSAGPMLTLLLLERLHAALGREIERTYAASGLNAAGWDLLLTLYRSAPEGLRPTELSALAAISGPSTSNRIVRLLEKGLIER-------REASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLEQ------------
2	SPARKS	2fbka	0.219	0.881	2.917	threading_2	--DTAALLERIRSDWARLNHGPSAGPMLTLLLLERLHAALGREIERTYAASGLNAAGWDLLLTLYRSAPEGLRPTELSALAAISGPSTSNRIVRLLEKGLI-------ERREASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLEQ------------
3	PROSPECT2	2fbkA	0.219	0.881	2.236	threading_3	--DTAALLERIRSDWARLNHGPSAGPMLTLLLLERLHAALGREIERTYAASGLNAAGWDLLLTLYSAPPEGLRPTELSALAAISGPSTSNRIVRLLEKGLI-------ERREASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLE------------Q
4	PPA-I	2fbkA	0.226	0.881	2.393	threading_4	--DTAALLERIRSDWARLNHGPSAGPMLTLLLLERLHAALGREIERTYAASGLNAAGWDLLLTLYRSAPEGLRPTELSALAAISGPSTSNRIVRLLEKGLIER-------REASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLEQ------------
5	HHPRED-l	2fbk_A	0.240	0.852	2.079	threading_5	---DTALLERIRSDWARLN----AGPMLTLLLLERLHAALGREIERTYAASGLNAAGWDLLLTLYRSAPEGLRPTELSALAAISGPSTSNRIVRLLEKGLIERRE-------ASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLEQ------------
6	HHPRED-g	2fbk_A	0.243	0.841	2.509	threading_6	---DTALLERIRSDWAG------AGPMLTLLLLERLHAALGREIERTYAASGLNAAGWDLLLTLYRSAPEGLRPTELSALAAISGPSTSNRIVRLLEKGLIERRE-------ASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLEQ------------
7	SP3	2fbka	0.219	0.881	3.039	threading_7	--DTAALLERIRSDWARLNHGPSAGPMLTLLLLERLHAALGREIERTYAASGLNAAGWDLLLTLYRSAPEGLRPTELSALAAISGPSTSNRIVRLLEKGLI-------ERREASIRLTPQGRALVTHLLPAHLATTQRVLAPLSAQEQRTLEELAGRMLAGLEQ------------
8	SAM-T99	2a61A	0.235	0.750	2.702	threading_8	------------------------------RILREICFMVKVEGRKVLRDFGITPAQFDILQKIYFEG--PKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEVIEKVIERRENFIEKITSDLGKEKSSKILDYLKELKGVMER------------
9	MUSTER	3gfiA	0.189	0.812	2.087	threading_9	---------------------SNENRIQIMSTIAKIYRAMSRELNRRLGELNLSYLDFLVLRATS---DGPKTMAYLANRYFVTQSAITASVDKLEEMGLVVRVRDREDRRKILIEITEKGLETFNKGIEIYKKLANEVTGDLSEDEVILVLDKISKILKRIEEISQ---------
10	SPARKS	2yr2a	0.190	0.807	2.831	threading_10	----------------------NENRIQIMSTIAKIYRAMSRELNRRLGELNLSYLDFLVLRATSDGP---KTMAYLANRYFVTQSAITASVDKLEEMGLVVRVRDREDRRKILIEITEKGLETFNKGIEIYKKLANEVTGDLSEDEVILVLDKISKILKRIEEISQ---------

Predicted Tertiary Structure


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TM-score=0.855 to 2fbkA SCOP code=a.4.5.28	TM-score=0.855 to 2fbkA SCOP code=a.4.5.28	TM-score=0.814 to 2fbkA SCOP code=a.4.5.28	TM-score=0.845 to 2fbkA SCOP code=a.4.5.28	TM-score=0.855 to 2fbkA SCOP code=a.4.5.28