Template-based Modeling Results for MIAA_ECOLI

Submitted Primary Sequence

>Length 316
MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIAG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIAG
CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHCCCCEECCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIAG
5442342323200000001110100000200420311000000020041011001212232122010000002112220101101200111021013223000000000000200021022222222301220231012201310031024001200231222123101201100211132112012122321222000000010213101210221023101210121021012313232311002000020002102230103200210111012002300110222310100103213201210120012125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIAG
1	MUSTER	2zm5A	0.957	0.946	2.991	threading_1	---------LPKAIFLGPTASGKTALAIELRKILPVELISVDSALIYKG-DIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEADITAA-GRIPLLVGGT-LYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQL-ASGFEAEVRALFARGDLHTDLPSIRCVGYRQ-WSYLEGEISYDE-VYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAI--
2	SPARKS	3foza	1.000	0.965	6.151	threading_2	------ASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVV-----
3	PROSPECT2	3fozA	1.000	0.965	4.792	threading_3	------ASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVV-----
4	PPA-I	2zm5A	0.957	0.946	3.813	threading_4	---------LPKAIFLGPTASGKTALAIELRKILPVELISVDSALIYKG-DIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEADITAA-GRIPLLVGGT-LYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQL-ASGFEAEVRALFARGDLHTDLPSIRCVGYRQ-WSYLEGEISYDE-VYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAI--
5	HHPRED-l	3exa_A	0.377	0.889	5.582	threading_5	--------KEKLVAIVGPTAVGKTKTSV-LAKRLNGEVISGDS-QVYRG-DIGTAKITAEE-DGVPHHLIDIKDPSESFSVADFQDLATPLITEIHERGRLPFLVGGTGLYVNAVIHQFNLGIRADEDYRHELEAFVNSYGVQALHDKLSKIDPKAAAAIHPNNYRRVIRALEIIKLTG--------------SPYNLV-IGLT-ERDVLYDRINRRVDQ-VEEGLIDEAKKLYDRGI--RDCQSVQAIGYKE-YDYLDGNVTLEEAIDTLKRNSRRYAKRQLTWFRNKANVTWFD-TDVDKKI-EIHNFIAGKL-
6	HHPRED-g	3exa_A	0.391	0.889	5.145	threading_6	--------KEKLVAIVGPTAVGKTKTSV-LAKRLNGEVISGDS-QVYRG-DIGTAKITAEE-DGVPHHLIDIKDPSESFSVADFQDLATPLITEIHERGRLPFLVGGTGLYVNAVIHQFNLGDRADEDYRHELEAFVNSYGVQALHDKLSKIDPKAAAAIHPNNYRRVIRALEIIKLTG-------------SPYNLV-IGLT--ERDVLYDRINRRVDQ-VEEGLIDEAKKLYDRGI--RDCQSVQAIGYKE-YDYLDGNVTLEEAIDTLKRNSRRYAKRQLTWFRNKANVTWFD-TDVD-FDKKI-EIHNFIAG
7	SP3	3foza	1.000	0.965	5.823	threading_7	------ASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVV-----
8	SAM-T99	2zm5A	0.977	0.946	5.527	threading_8	---------LPKAIFLGPTASGKTALAIELRKILPVELISVDSALIYKG-DIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAE-ADITAAGRIPLLVGGT-LYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQ-LASGFEAEVRALFARGDLHTDLPSIRCVGYRQ-WSYLEGEISYDE-VYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAI--
9	MUSTER	3d3qA	0.350	0.930	2.754	threading_9	--------KPFLIVIVGPTASGKTELSIEVAKKFNGEIISGDS-QVYQG-DIGTAKVTTEE-EGIPHYI-DILPPDASFSAYEFKKRAEKYIKDITRRGKVPIIAGGTGLYIQSLLYNYAFEISEDKKQVKLKLKELEHLNNNKLHEYLASFDKESAKDIHPNNRKRVLRAIEYYLKTKKLLSSRKKVQQFTENYDTLLIGI--ESRETLYLRINKRVDIL-GHGLFNEVQHLVEQG---FEASQSQAIGYKELVPVIKGNIS-ENAVEKLKQHSRQYAKRQLTWFKNK-NVHWLNKERSLQ-LDEITTQINKRS-
10	SPARKS	2zxua	1.000	0.968	6.092	threading_10	--------LPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAI--

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.587 to 1ex7A TM-score=0.985 to native SCOP code=c.37.1.1	TM-score=0.591 to 1ex7A TM-score=0.986 to native SCOP code=c.37.1.1	TM-score=0.598 to 1ex7A TM-score=0.991 to native SCOP code=c.37.1.1	TM-score=0.598 to 1ex7A TM-score=0.991 to native SCOP code=c.37.1.1	TM-score=0.587 to 1ex7A TM-score=0.985 to native SCOP code=c.37.1.1

Experimental Structure

Download 2zxuA

SCOP code=c.37.1.1