Template-based Modeling Results for MENA_ECOLI

Submitted Primary Sequence

>Length 308
MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPLVALLALITAGLLQILSNLANDYGDAVKGSDKPDRIGPLRGMQKGVITQQEMKRALIITVVLICLSGLALVAVACHTLADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLVFFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLVVRLGEVNARRYHACLLMGSLVCLALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDPVAMRPMLERTVKGALLTNLLFVLGIFLSQWAA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPLVALLALITAGLLQILSNLANDYGDAVKGSDKPDRIGPLRGMQKGVITQQEMKRALIITVVLICLSGLALVAVACHTLADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLVFFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLVVRLGEVNARRYHACLLMGSLVCLALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDPVAMRPMLERTVKGALLTNLLFVLGIFLSQWAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPLVALLALITAGLLQILSNLANDYGDAVKGSDKPDRIGPLRGMQKGVITQQEMKRALIITVVLICLSGLALVAVACHTLADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLVFFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLVVRLGEVNARRYHACLLMGSLVCLALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDPVAMRPMLERTVKGALLTNLLFVLGIFLSQWAA
55332212020002001020000000000000000122120100000000000000100010010000022112333321222113411023210220100000000000001001002110100000000000000000110122211110001000000000000000000202201010000000000000000001102202113433200000000221021000000000000000000021201000000000000020021013222222022001200100000000000000011115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPLVALLALITAGLLQILSNLANDYGDAVKGSDKPDRIGPLRGMQKGVITQQEMKRALIITVVLICLSGLALVAVACHTLADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLVFFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLVVRLGEVNARRYHACLLMGSLVCLALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDPVAMRPMLERTVKGALLTNLLFVLGIFLSQWAA
1	SPARKS	1wmwa	0.118	0.961	1.316	threading_1	LLARLDHPDPLYRDLLQDYPRRGGKMLRGLLTVYSALAHGAPLEAGLEAATALELFQNWVLVHDDIED-----GSEERRG--RPALHRLHPMPLALNAGDAMHAEMWGLLAEGLARGPPEVLLEFHEVVRRTAYGQHLDLLWGGTFDLRPEDYFRMVAAYYTAVAPLRLGALLAGKTPPAAYEEGGLRLGTAFQIVDDVLNLEGGEGDLYEGKRTLILLRFLEEAPPEERARALALLALPREAK--PEAEVGWLLERLLASRALAWAKAEAKREGLALLEAAFQDLPGKEALDHLRGLLAALVER---
2	PROSPECT2	3a0oA3	0.065	0.906	1.559	threading_2	RLWLNSEQLSAFADAVAKDPNHCGWAEFYEKSVEPWLERPVMCQEVIYAIRHLAIAGRVLDASRKWLLAVAAWDTKGATSRAYN-------------DEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVE--------FLATLYSPWAGTDGG--------WAEGPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNLKLGYNVRQFAGVTGNGHYQWYFDHIKADAFYNYGWWDLNFDDLVYRHDYP
3	PPA-I	3g61A1	0.122	0.929	1.265	threading_3	------------VSVLTMFRYWLDRLYMLVGTLAAIIHG---VALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKL-------EEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDGIGDKIGMFFQAMATFFGGFIIGFTRIGFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMM
4	SPARKS	1v4ea	0.117	0.834	1.106	threading_4	-NSYELEKVKERIEQILSQFFPEQILRVRLSILSFKNRGVEIGEDAISSLAALELVHLASLLHDDVID-----GARFRRG--KETINFMYGDKAAVAAGDLVLVSAFHTVEEI---GNNKLRRAFLNVIGKMSEAELIEQLSRYKP----ITKEEYLRIVEGGALFGLALQLPALGELGEDLYNLGVTIGTIYQMFDDIMDFAGMEKDLKNGVASFPLVTAMEKFPEARQMFE--------------NRDWSGLMSFMREKGILKECEETLKVLVKNVIISWLRDF----------------------
5	PROSPECT2	1ejlI	0.094	1.000	1.527	threading_5	INSNNLESQLQATQAARPKFVSFPIQFESAWALTNIASGTSEQTKAVVEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGLPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEAAGRQDQIQQVVNHGLVPFLVGVLTQKEAAWAITNYTSGGTVEQIVYLVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQKASLNLIEKYFS
6	PPA-I	3zuxA	0.096	0.877	1.239	threading_6	---------NILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGYIPWLLGIIMFGMGLTL------------------KPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCTASNVMTYLARGNVALS---VAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMVLLPIV--LGLIVHKVLGS------KTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGSGLAAALAAAHFAA
7	SPARKS	2dh4a	0.086	0.909	1.064	threading_7	DPVWSSQNESLISKPYNHILLKKNFRLNLIVQI--NRVMNLPKDQLAIVSQIVELLHNSSLLIDDIE-----DNAPLRRG--QTTSHLIFGVPSTINTANYMYFRAMQLVSEPLYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMGGLFRLTLRLMEALSPSSHHGHSLVPFINLLGIIYQIRDDYLNLKDFQEDITEGKLSFPIVHALNFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQILSLAYTKNFINQLVNMIKPDELLYIIDHLSEL-------------------
8	PROSPECT2	3kb9A	0.093	0.873	1.524	threading_8	AVPPSQETTRTWLLEMPADKVEEYADGLCYTDLMAGYYLGAPDEVLQAIADYSAWFFVWDDRHDRDIV--------------------HGRAGAWRRLRGLLHTATLVAGFADSVRPATWNARFARHFHTVIEAYDREFHNRTRGIVPGVEEYLELRRLTFAHWIWTDLLEPSSGCELPDAVRAYRRAALLSQEFAAWYNDLCSLPKEIAGDEVHNLGISTLEEAIGEVRRRVEECITEFLAVER-------------------DALRFADELADGTVRGKELSGAVRANVGNMRNWFSSVYWFHHES
9	PPA-I	3g61A4	0.083	0.857	1.091	threading_9	------------------------------GWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSLDEDVPPASFW-------RILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPET-------QRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYF
10	SPARKS	2ihia	0.096	0.916	1.048	threading_10	LEEEIKEHISKYYKLLFDYNCLNNRGILVILIYEYVKINSSEWEKAACLAWCIEILQAAFLVADDIMD-----KGEMRRNKYCWYLLKDVETKNAVNDVLLLYNSIYKLIEIYLRNCYVDVIATFRDATLKTIIGQHLDTNIQPVIDINMINFGVYKNIVIHFFLPIVCGMLLAGIAVDNLIYKKIEDISMLMGEYFQIH--DDYLSDIQNNKLTWPLIKTFELCSEPDKIKIVKNYGNNLACVKVIDSLKIRKHYESYEKAQKAKILSAINELHHEGIEYVLKYLLEI-------------------

Predicted Tertiary Structure


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TM-score=0.435 to 1kd9A SCOP code=h.1.3.1	TM-score=0.808 to 2q80A SCOP code=a.128.1.1	TM-score=0.602 to 1j0nA SCOP code=a.102.3.2	TM-score=0.460 to 1l8dA SCOP code=h.4.12.1	TM-score=0.840 to 1hm7B SCOP code=a.128.1.4