Template-based Modeling Results for MCRB_ECOLI

Submitted Primary Sequence

>Length 459
MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWFAFLGEGQEASNGIYPVILYYKDFDELVLAYGISDTNEPHAQWQFSSDIPKTIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKLIFNSGKSVIPPMSKTESYCLEDALNDLFIPETTIETILKRLTIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYRPNGVGFRRKDGIFYNFCQQAKEQPEKKYIFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTYSENDEERFYVPENVYIIGLMNTADRSLAVVDYALRRRFSFIDIEPGFDTPQFRNFLLNKKAEPSFVESLCQKMNELNQEISKEATILGKGFRIGHSYFCCGLEDGTSPDTQWLNEIVMTDIAPLLEEYFFDDPYKQQKWTNKLLGDS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWFAFLGEGQEASNGIYPVILYYKDFDELVLAYGISDTNEPHAQWQFSSDIPKTIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKLIFNSGKSVIPPMSKTESYCLEDALNDLFIPETTIETILKRLTIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYRPNGVGFRRKDGIFYNFCQQAKEQPEKKYIFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTYSENDEERFYVPENVYIIGLMNTADRSLAVVDYALRRRFSFIDIEPGFDTPQFRNFLLNKKAEPSFVESLCQKMNELNQEISKEATILGKGFRIGHSYFCCGLEDGTSPDTQWLNEIVMTDIAPLLEEYFFDDPYKQQKWTNKLLGDS
CCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHCCCCEEEEEEEHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEECCCCCEEEEEECCHHHHHHHHCCHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWFAFLGEGQEASNGIYPVILYYKDFDELVLAYGISDTNEPHAQWQFSSDIPKTIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKLIFNSGKSVIPPMSKTESYCLEDALNDLFIPETTIETILKRLTIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYRPNGVGFRRKDGIFYNFCQQAKEQPEKKYIFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTYSENDEERFYVPENVYIIGLMNTADRSLAVVDYALRRRFSFIDIEPGFDTPQFRNFLLNKKAEPSFVESLCQKMNELNQEISKEATILGKGFRIGHSYFCCGLEDGTSPDTQWLNEIVMTDIAPLLEEYFFDDPYKQQKWTNKLLGDS
554123112201210344333323322220330202001021201200000000322423310000000233131000010002223321122112301310120032122222432120121123312221312201200221132221011222212222231111002200221112320021002102133100021131101110012001111233222101002013212112103013122210212301012002203332331000000002302022000100200233332332201011233332212013000000001212201220221022212112033223232012101223112200310021022013101311221131020000000112332222102101300121001001200131122113112312334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MESIQPWIEKFIKQAQQQRSQSTKDYPTSYRNLRVKLSFGYGNFTSIPWFAFLGEGQEASNGIYPVILYYKDFDELVLAYGISDTNEPHAQWQFSSDIPKTIAEYFQATSGVYPKKYGQSYYACSQKVSQGIDYTRFASMLDNIINDYKLIFNSGKSVIPPMSKTESYCLEDALNDLFIPETTIETILKRLTIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYRPNGVGFRRKDGIFYNFCQQAKEQPEKKYIFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTYSENDEERFYVPENVYIIGLMNTADRSLAVVDYALRRRFSFIDIEPGFDTPQFRNFLLNKKAEPSFVESLCQKMNELNQEISKEATILGKGFRIGHSYFCCGLEDGTSPDTQWLNEIVMTDIAPLLEEYFFDDPYKQQKWTNKLLGDS
1	MUSTER	1r6bX	0.186	0.867	0.911	threading_1	IGDFEKRFKALLKQLEQDTNS----FIDEIHTI-----IGAGA-GQVP-IRVIG-----STTYQEFSNIFEKDRALARRFQKIDITEP--SIEETVQIINGLKPKYEAHHDVRYTELAVKYINDRHLPDKAIDVIDEAGARARLMPIESVVARIARIPEKSVSQSDRDTLKNLGDRLFGQDKAIEALTEAIKMARSFLFAGPTGVGKTEVTVQLSKALGIELL--RFDMSEYMERHTVSRLI-GAPPGYVGFD-QGGLLTDAVIKHPH-----AVLLLDEIEKAH-PDVFNILLQVMDNG--------TLTDNNGRKADF---RNVVLVMTTNAGVRAMEEIKKIF--------------TPEFRNRLDNILSTDVIHQVVDKFIVELQVQLDQKGVSLERNWLAEKGY---DRAMGA----RPMARVIQDNLKKPLANEL-GSLVDGGQVTVALDKEK
2	SPARKS	1qvra	0.153	0.854	3.252	threading_2	LESIDALERKKLQLEIEREALKKEKDPDSQERLK----------------AIEAEIAKLTEEI-------AKLRAEW----EREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVTEEDIAEIVSRWTGIPV------SKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARSFLFLGPTGVGKTELAKTLAATLDTEEAMIRIDMTEYMEKHAVSR----------------LQLTEAVRRRPY-----SVILFDEIEKAHP-DVFNILLQILDDGR--------LTDSHGRTVDF---RNTVIILTSNLGSPLILEGPYERIRDEVFKVLQQHF-RPEFLNRLDEIVVFRPLKEQIRQIVEIQLSYLRARLAEKRISLELAAKDFLAERGYDPVFGARPLRRVIQREETPLAQKILAGEVKEGDRVQVDVGPAG
3	PROSPECT2	1hr6a	0.088	0.813	1.464	threading_3	ART---------------------------DNFKLS------SLANGLKVATSNTPGHFSALGLYIYQCTSSRENLMYQASVF--------NQDVGKMLQLMSETVRFPKITEQELQEQKLSAEYEIDEVWMKPELVLPELLHTA-------------AYSGETLGSPLICPRGLIPSISKYYLLDYRNKFYTPENTVAAFV-GVPHEKALELTGKYLGDWQSTHPPITKKVAQYTGGESCIPPAPVFGNL-----------------PELFHIQIGFEGLPIDHPDIYALATLQTLGGPGKGMYSRLYTHVLNQYYFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSSLLMNLESKLVELEDMGRQVLMHGRKI--------------PVNEMISKIEDLKPDDISRVAEMIFTGNRGSFGDVENVLNSSS
4	PPA-I	1r6bX3	0.249	0.412	1.009	threading_4	--------------------------------------------------------------------------------------------------------------------------------------------------------IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARSFLFAGPTGVGKTEVTVQLSKALGI--ELLRFDMSEYMERHTVSRLI-GAPPGYVGFD-QGGLLTDAVIKHPH-----AVLLLDEIEKAH-PDVFNILLQVMDNG--------TLTDNNGRKADF---RNVVLVMTTNAGVRAMEEIKKIF--------------TPEFRNRLDNIIWFDH-----------------------------------------------------------------------------------
5	HHPRED-l	1r6b_X	0.172	0.887	2.126	threading_5	ESAIAEGLAWRIV---------QGDVPEVMADCTIAGTKYRGDFEKRF-KALLK-QLE-QDT--NSILFIDEIHTIIGAGAAGSTTYQEFSNIFEIDIIEELKPKYEAHHDVRYTAKARAAVELAYINDRHLPDKA-IDVIDEVVARIARIPEK--SVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMKPSFLFAGPTGVGKTEVTVQLSKALGIE--LLRFDMSEYMERHTVSRLIGA-PPGYVGFD-QGGLLTDAVIK-----HPHAVLLLDEIEKAHPD-VFNILLQVMDNGTLTDNNGRKA-----------DFRNVVLVMTTNAGVR----AMEEIKKIF-----TPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQK----GVSLEVSQEARNWLAEKGYDRAARPMARVIQDNLKKPLANELLFGSLVDGQVTNELTYG-
6	HHPRED-g	1r6b_X	0.197	0.885	6.163	threading_6	TKYRGDFEKRFLKQLEQDTAGAASDKPLLSGKIRVIGSTTYQRFQKIDIEPSIEETVQIINGLKPKYEAHHDVRYTAKAVAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVA-------DIESVVARIARIPE---------KSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARSFLFAGPTGVGKTEVTVQLSKALGIELL--RFDMSEYMERHTVSRLI-GAPPGYVGFD-QGGLLTDAVIKH-----PHAVLLLDEIEKAHPD-VFNILLQVMDNGT--------LTDNNGRKADF---RNVVLVMTTNAGVR--------------AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIKFIVELQVQLDQKGVSL--EVSQEARNWLAEKGYDRAMGARPMARVIQDNLKPLANELLFGSLVDGGQVTVALDKEK
7	SP3	1qvra	0.148	0.913	3.070	threading_7	LRGLKEKYEVHSDSAIIARYITERRLPDKAIDLIDEAARLRMALESAPQLEIEREALKKEKDPAIEAEIAKLTEEILRAEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVTEEDIAEIVSRWTGIPVSKLLEGE------REKLLRLEEELHKRVVGQDEAIRAVADAIRRARSFLFLGPTGVGKTELAKTLAATLFDEEAMIRIDMTEYMEKHAVSRL----------------QLTEAVRRRPY-----SVILFDEIEKAHP-DVFNILLQILDDGR--------LTDSHGRTVDF---RNTVIILTSNLGSPLILEGPYERIRDEVFKVLQQHF-RPEFLNRLDEIVVFRPLKEQIRQIVEIQLSYLRARLAEKRISLELAAKDFLAERGYDPVFGARPLRRVIQREETPLAQKILAGEVKEGDRVQVDVGPAG
8	SAM-T99	1qvrA	0.119	0.804	4.007	threading_8	VYVDEPTVEETISILRGLKEKYEVHHGVRISDSAII-------------------AAATLSHRYITERRLPDKAIDLIDEAAARLRPEEIDALERKKLQLEIEREALKKEKRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVSRWTGIPVSKLLLRLEEELHKRVVGQDEAIRAVADAIRRARSFLFLGPTGVGKTELAKTLAATLFDT--EEAMIRID-MTEYMEKHAVSRLQ------------LTEAVRR------RPYVILFDEIEKAHPD-VFNILLQILDDGRLTDSHGRTVDFR-----------NTVIILTSNLGS---QHFRPEFLNRLDEIVVFLTKEQIRQIVEIQLKRISLELTEAAKDFLAE--------------------------RGYDPVFGARPLRRVIQRELETPLAQ---------KILAGEVKEGD
9	MUSTER	2j69A	0.081	0.913	0.790	threading_9	LNKLAETINKAELAGDSSSGKLSTIASKNLQQGVFRLLV--GDMKR----ALIGENLVNPCTAVLTVLRYGPEKKVTIHFNDGKSPQQLDFQNFKYKYPAEAKKLEQEKKQAFPDVDYAVVEYPLTLLQKGIEIVDSLNDTEARNELSLGYVNNCHAILFVMRASQ-----------PCTLGERRYLENYIKRGLTVFFL----VNA---WDQVRESLIDPDDVEELQASENRLRQVFNANLAEYCTVEGQNIYDERVFIQALRRRLKNPQA-------DLDGTGFPKFMDSLNTFLTRERAIAELRQVRTLARLACNHT----REAVARRIPLLEQDVNELKKRIDSVEPEFNKLTGI-RDEFQKEIINTRDTRTISESFRSYVLNLGNTFENDFLRYQPELNL----FDFLSSGKREAFNAALQKAFEQYITDKSAAWTLTAEKDINAAFKELSRSA
10	SPARKS	1ksfx	0.156	0.919	3.048	threading_10	RGDFEKRFKALLKQLEQDTNSIL--FIDEIHTIIGAGAASGGQVDAA---NLI-KPLLSSGKIRVIGSFSNIFERRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAFLFAGPTGVGKTEVTVQLSKALGIE--LLRFDMSEYMERHTVSRLI-GAPPGYVGFD-QGGLLTDAVIKHPH-----AVLLLDEIEKAH-PDVFNILLQVMDNGT--------LTDNNGRKADF---RNVVLVMTTNAGVRNSTDAMEEIKKI----------FTPEFRNRLDNIIWFDHLTDVIHQVVDKFIVELQVQLDQKGVSLEVEARNWLAEKGYDRAMGARPMARVIQDNLKPLANELLFGSLVDGGQVTVALDKEK

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.605 to 1r6bX SCOP code=a.174.1.1	TM-score=0.633 to 1r6bX SCOP code=a.174.1.1	TM-score=0.728 to 1qvrA SCOP code=a.174.1.1	TM-score=0.722 to 1hr6A SCOP code=d.185.1.1	TM-score=0.647 to 1r6bX SCOP code=a.174.1.1