Template-based Modeling Results for LOLA_ECOLI

Submitted Primary Sequence

>Length 203
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEEEEEEECCCEEEEEECCCCCEEEEEECCEEEEECCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCEEEEEEECCCCCCCCHHHEEECCCCCCEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
43110000000000000000121021022103513202010202011232321220101010222210001023223100001121000112223201012133222211001003222211311102233210100122342312100010154220100100233432010102133222022210102114212012334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
1	MUSTER	2zpdA	0.995	0.897	3.469	threading_1	---------------------DAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKLPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
2	SPARKS	2w7qa	0.321	0.921	5.032	threading_2	-------------GSIAIDDSAAVQRLTGLLNKAQTLTARFSQLTLDGSGTRLQETAGQLSLKRPGLFRWHTDAPNEQLLISNGEKVWLYDPDLEQVTIQKLDQRLTQTPALLLSGDISKISESFAITYNVVDFVLKPKTKDTLFDTLRLSFR-SGKVNDMQMIDGVGQRTNILFFDKMNEALDAKQFTFDVPPGVDVIQE--
3	PROSPECT2	2w7qA	0.321	0.921	3.180	threading_3	GS-------------IAIDDSAAVQRLTGLLNKAQTLTARFSQLTLDGSGTRLQETAGQLSLKRPGLFRWHTDAPNEQLLISNGEKVWLYDPDLEQVTIQKLDQRLTQTPALLLSGDISKISESFAITGNVVDFVLKPKTKDTLFDTLRLSFR-SGKVNDMQMIDGVGQRTNILFFDKMNEALDAKQFTFDVPPGVDVIQ--E
4	PPA-I	2zpdA	0.995	0.897	4.504	threading_4	---------------------DAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKLPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
5	HHPRED-l	1iwl_A	1.000	0.867	7.442	threading_5	---------------------DAASDLKSRLDKVSSFHASFTQKVTD-----VQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQR-
6	HHPRED-g	1iwl_A	1.000	0.872	6.975	threading_6	---------------------DAASDLKSRLDKVSSFHASFTQKVTD-----VQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
7	SP3	1iwla	0.994	0.872	4.562	threading_7	---------------------DAASDLKSRLDKVSSFHASFTQKVTDV-----QEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
8	SAM-T99	2zpdA	0.994	0.892	5.649	threading_8	---------------------DAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKLPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQR-
9	MUSTER	2w7qA	0.321	0.921	3.084	threading_9	-------------GSIAIDDSAAVQRLTGLLNKAQTLTARFSQLTLDGSGTRLQETAGQLSLKRPGLFRWHTDAPNEQLLISNGEKVWLYDPDLEQVTIQKLDQRLTQTPALLLSGDISKISESFAITGNVVDFVLKPKTKDTLFDTLRLSFR-SGKVNDMQMIDGVGQRTNILFFDKMNEALDAKQFTFDVPPGVDVIQE--
10	SPARKS	1iwla	0.994	0.872	4.802	threading_10	---------------------DAASDLKSRLDKVSSFHASFTQKVTDV-----QEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.599 to 1iwmA TM-score=0.916 to native SCOP code=b.125.1.2	TM-score=0.599 to 1iwmA TM-score=0.916 to native SCOP code=b.125.1.2	TM-score=0.627 to 1iwmA TM-score=0.837 to native SCOP code=b.125.1.2	TM-score=0.623 to 1iwmA TM-score=0.839 to native SCOP code=b.125.1.2	TM-score=0.599 to 1iwmA TM-score=0.916 to native SCOP code=b.125.1.2

Experimental Structure

Download 2zpcA

SCOP code=b.125.1.2