Template-based Modeling Results for LEXA_ECOLI

Submitted Primary Sequence

>Length 202
MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEECCHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCEEEEEEEEEECCEEEEEECCCCCCCEEECCCCCEEEEEEEEEEEEECCCCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL
5541323012002002200332310011110034031302210120020023221232221212122123232311111030111322222322311010122113331100020221112321012000000222331431100001034200011022223200000212414101012442101010000000131324
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL
1	MUSTER	1jhhA	0.995	0.975	3.934	threading_1	-KALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMAMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRN----
2	SPARKS	3k2za	0.356	0.946	4.608	threading_2	--DLTERQRKVLLFIEEFIEKNGYPPSVREIARRFRITP-RGALLHLIALEKKGYIER---KPRALRISKSIRNKIPLIGEIRAGEKREAIEYLEDYIEIPESFLSSGYHFLLKVKGESMIEEHICDGDLVLVRRQDWAQNGDIVAAMVDGEVTLAKFYQRGDTVELRPANREMSSMFFRA--EKVKILGKVVGVFRKL---
3	PROSPECT2	3k2zA	0.361	0.946	4.469	threading_3	--DLTERQRKVLLFIEEFIEKNGYPPSVREIARRFRITPRGALL-HLIALEKKGYIER---KPRALRISKSIRNKIPLIGEIRAGEKREAIEYLEDYIEIPESFLSSGDHFLLKVKGESMIEEHICDGDLVLVRRQDWAQNGDIVAAMVDGEVTLAKFYQRGDTVELRPANREMSSMFFR--AEKVKILGKVVGVFRK---L
4	PPA-I	1jhhA	0.995	0.975	4.363	threading_4	-KALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMAMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRN----
5	HHPRED-l	1jhf_A	0.995	0.975	5.729	threading_5	-KALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAADEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRN----
6	HHPRED-g	1jhf_A	0.995	0.975	5.967	threading_6	-KALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAADEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRN----
7	SP3	3k2za	0.356	0.946	4.990	threading_7	--DLTERQRKVLLFIEEFIEKNGYPPSVREIARRFRITP-RGALLHLIALEKKGYIER---KPRALRISKSIRNKIPLIGEIRAGEKREAIEYLEDYIEIPESFLSSGYHFLLKVKGESMIEEHICDGDLVLVRRQDWAQNGDIVAAMVDGEVTLAKFYQRGDTVELRPANREMSSMFFRA--EKVKILGKVVGVFRKL---
8	SAM-T99	1jhhA	0.995	0.975	6.194	threading_8	-KALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMAMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRN----
9	MUSTER	3k2zA	0.356	0.946	3.921	threading_9	--DLTERQRKVLLFIEEFIEKNGYPPSVREIARRFRITP-RGALLHLIALEKKGYIERKP---RALRISKSIRNKIPLIGEIRAGEKREAIEYLEDYIEIPESFLSSGYHFLLKVKGESMIEEHICDGDLVLVRRQDWAQNGDIVAAMVDGEVTLAKFYQRGDTVELRPANREMSSMFFRA--EKVKILGKVVGVFRKL---
10	SPARKS	1jhfa	0.995	0.975	4.362	threading_10	-KALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAADEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRN----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.984 to 1jhhA TM-score=0.986 to native SCOP code=a.4.5.2	TM-score=0.984 to 1jhhA TM-score=0.986 to native SCOP code=a.4.5.2	TM-score=0.689 to 1jhhA TM-score=0.582 to native SCOP code=a.4.5.2	TM-score=0.693 to 1jhhA TM-score=0.589 to native SCOP code=a.4.5.2	TM-score=0.984 to 1jhhA TM-score=0.986 to native SCOP code=a.4.5.2

Experimental Structure

Download 1jhfA

SCOP code=a.4.5.2