Template-based Modeling Results for LEUD_ECOLI

Submitted Primary Sequence

>Length 201
MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTYRFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTYRFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN
CCCCCEEEEEEEEECCCCCCCHHCCCCHHHHCCCCHHHHHHHHHHHEEECCCCCCCCCCCCHHCCHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTYRFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN
542412201010000211201011000220033122210010012101012331332223122213312200000023111012011000100321102000010001000000131410002022210120011132332220201032110202421020202201120012000100000211310111222023115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTYRFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN
1	MUSTER	3q3wA	0.503	0.881	4.366	threading_1	-AQKFIIHKGIACPLEYANIDTDQIIPKQFLLAVSKQGFGKHLFHDLRYLDDKE-SVLNDFNLNKKEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIAPSFADIFKNNALGNGLLTIELAKDEVLEIVDELKKSQDKNIEISLLEKRVFFKDKIFSFDLDDFHRICLLEGLDNI----------------------
2	SPARKS	3q3wa	0.503	0.881	6.319	threading_2	-AQKFIIHKGIACPLEYANIDTDQIIPKQFLLAVSKQGFGKHLFHDLRYLDDKE-SVLNDFNLNKKEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIAPSFADIFKNNALGNGLLTIELAKDEVLEIVDELKKSQDKNIEISLLEKRVFFKDKIFSFDLDDFHRICLLEGLDNI----------------------
3	PROSPECT2	3q3wA	0.503	0.881	4.734	threading_3	-AQKFIIHKGIACPLEYANIDTDQIIPKQFLLAVSKQGFGKHLFHDLRYLDDKES-VLNDFNLNKKEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIAPSFADIFKNNALGNGLLTIELAKDEVLEIVDELKKSQDKNIEISLLEKRVFFKDKIFSFDLDDFHRICLLEGLDNI----------------------
4	PPA-I	3q3wA	0.503	0.881	6.174	threading_4	-AQKFIIHKGIACPLEYANIDTDQIIPKQFLLAVSKQGFGKHLFHDLRYLDDKE-SVLNDFNLNKKEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIAPSFADIFKNNALGNGLLTIELAKDEVLEIVDELKKSQDKNIEISLLEKRVFFKDKIFSFDLDDFHRICLLEGLDNI----------------------
5	HHPRED-l	2hcu_A	0.462	0.861	6.931	threading_5	SMEEFTIYTGTTVPLMNDNIDTDQILPKQFLKLIDKKGFGKYLMYEWRYLDNNY-TENPDFIFNQPEYREASILITGDNFGAGSSREHAAWALADYGFKVIVAGSFGDIHYNNDLNNGILPIIQPKEVRDKLAK---LKPTDEVTVNLFEQKIYSPVGDFSFDIDGEWKHKLLNGLD------------------------
6	HHPRED-g	2hcu_A	0.462	0.861	6.538	threading_6	SMEEFTIYTGTTVPLMNDNIDTDQILPKQFLKLIDKKGFGKYLMYEWRYLDNN-YTENPDFIFNQPEYREASILITGDNFGAGSSREHAAWALADYGFKVIVAGSFGDIHYNNDLNNGILPIIQPKEVRDKLAK---LKPTDEVTVNLFEQKIYSPVGDFSFDIDGEWKHKLLNGLD------------------------
7	SP3	3q3wa	0.503	0.881	6.488	threading_7	-AQKFIIHKGIACPLEYANIDTDQIIPKQFLLAVSKQGFGKHLFHDLRYLDDK-ESVLNDFNLNKKEYQNSSILVSFENFGSGSSREHAPWALVDYGIRAIIAPSFADIFKNNALGNGLLTIELAKDEVLEIVDELKKSQDKNIEISLLEKRVFFKDKIFSFDLDDFHRICLLEGLDNI----------------------
8	SAM-T99	2hcuA	0.468	0.861	6.810	threading_8	SMEEFTIYTGTTVPLMNDNIDTDQILPKQFLKLIDKKGFGKYLMYEWRYLDNNYT-ENPDFIFNQPEYREASILITGDNFGAGSSREHAAWALADYGFKVIVAGSFGDIHYNNDLNNGILPIIQPKEVRDKLAKL---KPTDEVTVNLFEQKIYSPVGDFSFDIDGEWKHKLLNGLD------------------------
9	MUSTER	3h5eA	0.461	0.766	3.696	threading_9	---AFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRS--------DPAFVLNLSPFDRGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVEILWKLIEQSPGLEITANLQDRIITAATVVLPFKID------------------------------------
10	SPARKS	3h5ea	0.461	0.766	5.394	threading_10	---AFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRS--------DPAFVLNLSPFDRGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVEILWKLIEQSPGLEITANLQDRIITAATVVLPFKID------------------------------------

Predicted Tertiary Structure


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TM-score=0.712 to 1v7lB SCOP code=c.8.2.1	TM-score=0.713 to 1v7lB SCOP code=c.8.2.1	TM-score=0.712 to 1v7lB SCOP code=c.8.2.1	TM-score=0.709 to 1v7lB SCOP code=c.8.2.1	TM-score=0.712 to 1v7lB SCOP code=c.8.2.1