Template-based Modeling Results for HYDN_ECOLI

Submitted Primary Sequence

>Length 175
MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF
CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCEEECCCCEEEECCCCCCCCCCCHHCCCCCCCEEECCCEEEECCCCCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF
4211000012301003000100131243333212020111122121242210000110210320100300112000234100000333010010001001110010123222332221232423312010011023233101002101130000012320231013223211223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF
1	MUSTER	2vpzB	0.304	0.903	3.873	threading_1	MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVG-EYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLH----------------PAGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVD
2	SPARKS	1h0hb	0.239	0.909	4.622	threading_2	-SKGFFVDTTRCTACRGCQVACKQWHGNPATPTENTLVRMHEQEIDGRIDWLFFPDQCRHCIAPPCKATADMSAIIHATGCVLFTPKDLEDYESVISACPYDVPRK---------------VAESNQMAKCDMCIDRGLRPACVTSCPTGAMNFGDLSEMEAMASARLAEIKAAY
3	PROSPECT2	2vpwB	0.304	0.903	3.240	threading_3	MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVG-EYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYL----------------HPAGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAESEVH
4	PPA-I	2vpzB	0.297	0.903	7.160	threading_4	PRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVG-EYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLH----------------PAGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVD
5	HHPRED-l	1kqf_B	0.247	0.926	4.369	threading_5	KAEVKLIDVSTCIGCKACQVACSEWNDIRDEVGHCVGVRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAAIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDN------------RVYKCTLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKGV-
6	HHPRED-g	2ivf_B	0.287	0.914	4.771	threading_6	RQLVTVIDLNKCLGCQTCTVACKNIWTKRPGMRWNNVTTYQGGGKWPNPFFFYLARMCNHCTNPACLAACPTGAIYKENGIVLVDQERCKGHRHCVEACPYKAIYFN---------------PVSQTSEKCILCYPRGIANACNRQCPGRVRAFGYLDDTTSHVHKLVKKWALPL
7	SP3	1h0hb	0.239	0.909	4.477	threading_7	-SKGFFVDTTRCTACRGCQVACKQWHGNPATPTENKLVRMHEQEIDGRIDWLFFPDQCRHCIAPPCKATADMSAIIHATGCVLFTPKDLEDYESVISACPYDVPRKV---------------AESNQMAKCDMCIDRGLRPACVTSCPTGAMNFGDLSEMEAMASARLAEIKAAY
8	SAM-T99	2vpzB	0.309	0.869	5.487	threading_8	-RYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIR-EREVGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLHPAG----------------YVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKA-----
9	MUSTER	1ti4B1	0.263	0.891	3.403	threading_9	MQYYMVIDVAKCQDCNNCFMGCMDEHELNEGHRWMNIERRERG-TYPRNDINYRPTPCMHCENAPCV-AKGNGAVYQEDGIVLIDPEKAKGKKELLDTCPYGVMYWN---------------EEENVAQKCTMCAHLPKMPRCAHNCGSFV--YEFLKTTPEAMAKKVEEEGLEV
10	SPARKS	2vpwb	0.304	0.903	4.602	threading_10	MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVG-EYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTDGLVLVDPKKCIACGACIAACPYDARYLH----------------PAGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVD

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.735 to 1ti4B SCOP code=b.3.5.1	TM-score=0.732 to 1ti4B SCOP code=b.3.5.1	TM-score=0.794 to 1h0hB SCOP code=d.58.1.5	TM-score=0.722 to 1ti4B SCOP code=b.3.5.1	TM-score=0.735 to 1ti4B SCOP code=b.3.5.1