Template-based Modeling Results for HDED_ECOLI

Submitted Primary Sequence

>Length 190
MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFVSGDILSTVVGALLICSGIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPELGIFAIAAFIAGLFCVAGVIRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVSVTLVSTLVGIELIFSAASLFSFASLFVKQQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFVSGDILSTVVGALLICSGIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPELGIFAIAAFIAGLFCVAGVIRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVSVTLVSTLVGIELIFSAASLFSFASLFVKQQ
CCEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFVSGDILSTVVGALLICSGIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPELGIFAIAAFIAGLFCVAGVIRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVSVTLVSTLVGIELIFSAASLFSFASLFVKQQ
3211112101301230032122000000000000000011111111211010100000000000000011242321220000000000000000001212210010000000000000000101200211314001010000000000000001111200000000000011000000001012112334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFVSGDILSTVVGALLICSGIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPELGIFAIAAFIAGLFCVAGVIRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVSVTLVSTLVGIELIFSAASLFSFASLFVKQQ
1	PROSPECT2	1r2fA	0.068	1.000	1.041	threading_1	ISAINIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNIAGAAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSPLQRKAQIILAHYVSDEPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALYAETG
2	PPA-I	1pw4A2	0.106	0.895	1.134	threading_2	FVYLLRYGILDWSPTYLKEVLDKSSWAYFLYEYAGIPGTLLKVFRGNRGATGVFFMTLVTIATIVYWMNPA---------GNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTG--------LFGYLGGSVAASAIVGYTVDFFG---WDGGFMVMIGGSILAVILLIVVMIGEKRRHE
3	PROSPECT2	1h0oa	0.100	1.000	1.008	threading_3	DLSKDIQHWEALKPDERHFISHVLAFFAASNLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLLISRDEGLHCDFACLMFKHLVHKPAEQRVREIIAVRIEMKQYIEFVADRLMLEME
4	PPA-I	3p5nA	0.184	0.800	1.044	threading_4	------------------QQNKRLITISMLSAIAFVLTFIKPFLPPSLLATFPVAGIIVALVKNLLNYLFS-MGDPVGPFANFLAGASFLLTAYAIYKNKRSTKSLITGLIIATIVMTIVLSILNYF------------VLLPLYGMKVIIVSGIIP------FNIIKGIVISIVFILLYRRLANFLKR-
5	PPA-I	1pv6A2	0.151	0.905	1.015	threading_5	-----------FSLKLALELFRQPKLWFLSLYVIGVSCTYFATGERVFGYVTTMGELLNASIMFFAPLIINRI-GGKNALLLAGTIMSVRIIGSSFATSAEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSAFFKQLAMIFMSVLAGNMYESIG------FQGAYLVLGLVALGFTLISVFTLSGPGP
6	PPA-I	2yl4A1	0.134	0.942	1.012	threading_6	----GLPEARKL-LGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQRIVNRLRTSLFSSILRQESVTENLSDGLRAGAQASVGISMMFF------VSPNLATFVLSVTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREP
7	PPA-I	3am6A	0.045	0.932	1.012	threading_7	-----------MADVETETGMIAQWIVFAIMAAAAIAFGVAVHFRPLKSAYYINIAICTIAATAYYAMAVNERQVVYARYIDWVLTTPLLLLDLIVMTKMGGVMISWVIGADIFMIVFGILGAFEDEHKFKW--VYFIAGCVMQAVLTYGMYNATWKDDKSPEYHSSYVSLLVFLSILWVFYPVVWAFGS
8	MUSTER	1pw4A2	0.146	0.937	0.801	threading_8	----TAKQIFM--QYVLPNKLLWYIAIANVFVYLLRYGILSPTKSSWFLYEYAGIPGTLLCGWMSDKVFRGNR---GATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLI-YGPVMLIGLH-PKKAAGAGFTGLFGYLGGSVAASAI-VGYTVDFFGGFMVMIGGSILAVILLIVVMIGEKRRH
9	SPARKS	3gi8c	0.142	0.926	0.866	threading_9	YVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFISSAMNATIY--GGANVAYSLAKDGVWFKSTEGLYITSALGVLFALLFNMEG-VASITSAVFMVIYLFVILSHYILIDEVRKEIVI-FSFIVVLGVFLLLLYYQWIT----------NRFVFYGIIATFIGVLIFEIIYRKVT
10	PROSPECT2	1pw4A2	0.073	0.942	0.976	threading_10	T-----------AKQIFMQYKLLWYIAIANVFVYLLRYGIHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRP

Predicted Tertiary Structure


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TM-score=0.606 to 1c9bA SCOP code=a.74.1.2	TM-score=0.726 to 1uzrB SCOP code=a.25.1.2	TM-score=0.821 to 1pw4A SCOP code=f.38.1.1	TM-score=0.882 to 1pw4A SCOP code=f.38.1.1	TM-score=0.773 to 1h0nA SCOP code=a.25.1.2