Template-based Modeling Results for GMHA_ECOLI

Submitted Primary Sequence

>Length 192
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK
443310321022002001200432121300220021002003220100000000000000100120122133323000000001100000012221122000210221033100000001212122002001003422020000003221302210000000122221310110000000000200132125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK
1	MUSTER	2i2wA	1.000	1.000	3.277	threading_1	MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK
2	SPARKS	1x92a	0.463	0.979	4.278	threading_2	M-QHRIRQLFQASIETKQQALEV--LPPYIEQASLVMVNALLNEGKILSCGNGGSAGDAQHFSSELLNRFERERPSLPAVALTDSSTITSIANDYSYNEVFSKQIRALGQPGDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLEDVEIRVPSKIT-ARIQEVHLLAIHCLCDLIDRQLFG
3	PROSPECT2	2x3yA	0.398	0.995	3.321	threading_3	RELTYITNSIAEAQRVMAAMLADERLLATVRKVADACIASIAQGGKVLLAGNGGSAADAQHIAGEFVSRFAFDRPGLPAVALTDTSILTAIGNDYGYEKLFSRQVQALGNEGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLEVPSAD-TPKIQEGHLVLGHIVCGLVEHSIFG
4	PPA-I	2i2wA	1.000	1.000	3.148	threading_4	MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK
5	HHPRED-l	2i2w_A	1.000	0.995	3.854	threading_5	MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMV-
6	HHPRED-g	1x92_A	0.450	0.984	4.873	threading_6	DMQHRIRQLFQASIETKQQA--LEVLPPYIEQASLVMVNALLNEGKILSCGNGGSAGDAQHFSSELLNRFERERPSLPAVALTDSSTITSIANDYSYNEVFSKQIRALGQPGDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLEDVEIRVPSK-ITARIQEVHLLAIHCLCDLIDRQLFG
7	SP3	1x92a	0.463	0.979	4.726	threading_7	M-QHRIRQLFQASIETKQQALEV--LPPYIEQASLVMVNALLNEGKILSCGNGGSAGDAQHFSSELLNRFERERPSLPAVALTDSSTITSIANDYSYNEVFSKQIRALGQPGDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLEDVEIRVPSKIT-ARIQEVHLLAIHCLCDLIDRQLFG
8	SAM-T99	1x92B	0.455	0.984	5.011	threading_8	DMQHRIRQLFQASIETKQQAL--EVLPPYIEQASLVMVNALLNEGKILSCGNGGSAGDAQHFSSELLNRFERERPSLPAVALTDSSTITSIANDYSYNEVFSKQIRALGQPGDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLLDVEIRVPSKI-TARIQEVHLLAIHCLCDLIDRQLFG
9	MUSTER	2x3yA	0.398	0.995	3.134	threading_9	RELTYITNSIAEAQRVMAAMLADERLLATVRKVADACIASIAQGGKVLLAGNGGSAADAQHIAGEFVSRFAFDRPGLPAVALTDTSILTAIGNDYGYEKLFSRQVQALGNEGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLEVPSAD-TPKIQEGHLVLGHIVCGLVEHSIFG
10	SPARKS	2i22a	1.000	0.932	4.152	threading_10	MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISD-------------NDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK

Predicted Tertiary Structure


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TM-score=0.867 to 1x92B TM-score=0.992 to native SCOP code=c.80.1.3	TM-score=0.867 to 1x92B TM-score=0.992 to native SCOP code=c.80.1.3	TM-score=0.958 to 1x92B TM-score=0.882 to native SCOP code=c.80.1.3	TM-score=0.936 to 1x92B TM-score=0.883 to native SCOP code=c.80.1.3	TM-score=0.867 to 1x92B TM-score=0.992 to native SCOP code=c.80.1.3

Experimental Structure

Download 2i2wA

SCOP code=c.80.1.3