Template-based Modeling Results for GLNP_ECOLI

Submitted Primary Sequence

>Length 219
MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL
551112001200110020010000000000000000000000031110200110010002002101000000000000010012030110000000000000000000020003102310110031011121100010000100220011002100100110000000001201210220011102000000000000000000011013212311323
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL
1	MUSTER	3dhwA	0.194	0.895	2.880	threading_1	-----------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVI--VGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGD----------
2	SPARKS	3dhwa	0.209	0.895	8.042	threading_2	-----------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVI--VGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNA-TVMNTVLVLLVILVYLIQFAGD---------
3	PROSPECT2	3dhwA	0.199	0.895	2.887	threading_3	M-----------WLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVI--VGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFA----------GD
4	PPA-I	3dhwA	0.194	0.895	7.173	threading_4	-----------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVI--VGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGD----------
5	HHPRED-l	3tui_A	0.206	0.954	4.517	threading_5	--MS----EPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVI-VGTS-IGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYN-ATVMNTVLVLLVILVYLIQFAGDRIVRAVTR-
6	HHPRED-g	3tui_A	0.211	0.954	4.765	threading_6	--MS----EPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIV-GTSI-GLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYN-ATVMNTVLVLLVILVYLIQFAGDRIVRAVTR-
7	SP3	3dhwa	0.209	0.895	6.068	threading_7	-----------MWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVI--VGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNAT-VMNTVLVLLVILVYLIQFAGD---------
8	SAM-T99	3dhwA	0.214	0.877	2.765	threading_8	MW-----------LLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTNAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIV--GTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGNATVMNTVLVLLVILVYLI--------------QFAGD
9	MUSTER	3d31C	0.174	0.945	1.200	threading_9	EDFSVKAAGN--RSVISSIFLSLYAGFLATLLALLLGAPTGYILARFDFPGKRLVESIIDVVVPHTVAGIALLTVFGIGEPLSYIQFRALPGIVVAMLFVSMPYLANSAREGFKSVDPRLENAARSLGAPLWKAFFFVTLPLSARYLLIGSVMTWARAISEFGAVVILAYPMVGPTLIYDRFISYG-LSASRPIAVLLILVTLSIFLVIR---------
10	SPARKS	2onkc	0.145	0.977	2.915	threading_10	QLFNFDEFLKAAPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVALRIIVG-----

Predicted Tertiary Structure


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TM-score=0.897 to 3dhwA SCOP code=f.58.1.1	TM-score=0.918 to 3dhwA SCOP code=f.58.1.1	TM-score=0.887 to 3dhwA SCOP code=f.58.1.1	TM-score=0.914 to 3dhwA SCOP code=f.58.1.1	TM-score=0.897 to 3dhwA SCOP code=f.58.1.1