Template-based Modeling Results for GHRA_ECOLI

Submitted Primary Sequence

>Length 312
MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHREDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHREDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY
CEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCHHHHHHCCCCEEEEEEECCCCCCCHHHHHCCCEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCCCCHHHHHHHCCEEEECCCCCHHHHCCCCHHHHHCCCCCEEEEECCCCCEECHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHREDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY
210000022231320020025102302010022134420100001212210220330100000000011010311232200111001011322010210000000000100130320221143221332232323201000000020012002004314010000031342231120102333021002302000000110331220012200230330000000020100013000100420201000010123211233011030210000000011121210021002000202422302122242413
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHREDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY
1	MUSTER	3kboA	0.740	0.974	3.121	threading_1	-EIIFYHPTFNAAWWVNALEKALPHARVREWKVGDNNPADYALVWQPPVEL-AGRRLKAVFVLGAGVDAIL-SKLNAHPELDASIPLFRLEDTGGL--QQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFS-VGIGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGA-LDVFSQEPLPQESPLWRHPRVA-TPHIAAVTRPAEAIDYISRTITQLEKGEPVTGQVDRARGY
2	SPARKS	3kboa	0.740	0.974	3.874	threading_2	-EIIFYHPTFNAAWWVNALEKALPHARVREWKVGDNNPADYALVWQPPVEL-AGRRLKAVFVLGAGVDAIL-SKLNAHPELDASIPLFRLEDTGGLQ--QEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFS-VGIGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGA-LDVFSQEPLPQESPLWRHPRVA-TPHIAAVTRPAEAIDYISRTITQLEKGEPVTGQVDRARGY
3	PROSPECT2	3kboA	0.760	0.974	4.522	threading_3	-EIIFYHPTFNAAWWVNALEKALPHARVREWKVGDNNPADYALVWQPPVE-LAGRRLKAVFVLGAGVDAILSKL-NAHPELDASIPLFRLEDTGGL--QQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGI-GAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGA-LDVFSQEPLPQESPLWRHPRV-ATPHIAAVTRPAEAIDYISRTITQLEKGEPVTGQVDRARGY
4	PPA-I	3kboA	0.737	0.974	3.950	threading_4	-EIIFYHPTFNAAWWVNALEKALPHARVREWKVGDNNPADYALVWQPPVEL-AGRRLKAVFVLGAGVDAI-LSKLNAHPELDASIPLFRLEDTGGL--QQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFS-VGIGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGA-LDVFSQEPLPQESPLWRHPRVA-TPHIAAVTRPAEAIDYISRTITQLEKGEPVTGQVDRARGY
5	HHPRED-l	3evt_A	0.227	0.958	2.782	threading_5	-SLVLMAQATKPEQ-LQQLQTTYPDWTFKDAAAVTYDQIEVMYGNHPKTILARTNQLKFVQVISAGVDYLPLKALQAAGVVVANTSG------IHADAISESVLAAMLSVVRGYHAAWLNQRGARWAPMTTSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAHATVFPIFAANFAQFVKGTLVRNQVD-----
6	HHPRED-g	3pp8_A	0.763	0.958	2.634	threading_6	-EIIFYHPTFNAAWWVNALEKALPHARVREWKVGDNNPADYALVWQPPVELAGR-RLKAVFVLGAGVDAILSKLNAHPE-LDASIPLFRL--TG-GLQ-QEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGI-GAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGA-LDVFSQEPLPQESPLWRHPRVA-TPHIAAVTRPAEAIDYISRTITQLEKGEPVTGQVDRA---
7	SP3	3kboa	0.737	0.974	3.978	threading_7	-EIIFYHPTFNAAWWVNALEKALPHARVREWKVGDNNPADYALVWQPP-VELAGRRLKAVFVLGAGVDAIL-SKLNAHPELDASIPLFRLEDTGG--LQQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFS-VGIGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGA-LDVFSQEPLPQESPLWRHPRV-ATPHIAAVTRPAEAIDYISRTITQLEKGEPVTGQVDRARGY
8	SAM-T99	3hg7A	0.272	0.968	3.117	threading_8	SQRTLLLLSQDNAHYERLLKAAHLPHLRILRADNKLIGEAHILMAEPARLLAKANKLSWFQSTYAGVDVLLDARCRRDYQ-------LTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFPDDVAQIFVRNYIRFIDGQPLDGKIDFD---
9	MUSTER	3hg7A	0.280	0.962	2.869	threading_9	RTLLLLSQ--DNAHYERLLKAALPHLRILRADNKLIGEAHILMAERAKPLLAKANKLSWFQSTYAGVDV-LLDARCRRDYQLTNVR------GIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFPDDVAQIFVRNYIRFIDGQPLDGKIDFD---
10	SPARKS	1ygya	0.250	0.949	3.734	threading_10	LPVVLIADKLAPSTVRDKLLAAVPEADALLVRSATTVD---------AEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAP------TSNIHSAAEHALALLLAASRQIPAADASLREHTWKRFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEP-CTDSPLFELAQVVVTPHLGASTAQDRAGTDVAESVRLALAGEFVPDAVNVGGGV

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.839 to 1qp8A SCOP code=c.2.1.4	TM-score=0.843 to 1qp8A SCOP code=c.2.1.4	TM-score=0.841 to 1qp8A SCOP code=c.2.1.4	TM-score=0.845 to 1qp8A SCOP code=c.2.1.4	TM-score=0.841 to 1qp8A SCOP code=c.2.1.4