Template-based Modeling Results for GFCC_ECOLI

Submitted Primary Sequence

>Length 248
MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPGEQQTLSVGPVENVVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPGEQQTLSVGPVENVVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPD
CCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPGEQQTLSVGPVENVVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPD
43311111000000000121113120102022332102023231022002213222311120021121212231231022002201213232333101102102310240322010002011200212332212022211010042322010001121102021221220110022033122133310000003130110200111332221220010000012321233022012200200133134
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPGEQQTLSVGPVENVVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPD
1	MUSTER	3p42A	0.933	0.899	2.953	threading_1	-----------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVAQLASWEA-EADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKN-NVVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
2	SPARKS	3p42a	0.964	0.899	5.018	threading_2	-----------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQH-VAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKN-NVVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
3	PROSPECT2	3p42A	0.969	0.899	3.763	threading_3	-----------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHV-AQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKN-NVVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPH
4	PPA-I	3p42A	0.933	0.899	5.000	threading_4	-----------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVAQLASWEA-EADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKN-NVVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
5	HHPRED-l	3p42_A	0.991	0.895	9.962	threading_5	----------------------QG-VTIYLPGEQQTLSVGPVENVAQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHV-AQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKNNV-VITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVP-
6	HHPRED-g	3p42_A	0.968	0.895	7.801	threading_6	----------------------QG-VTIYLPGEQQTLSVGPVENVAQLVTQP-QLRDLWWPGALLTDSAAKAKALKDYQHV-AQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKNNV-VITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
7	SP3	3p42a	0.964	0.899	4.676	threading_7	-----------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVA-QLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKN-NVVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
8	SAM-T99	3p42A	0.973	0.895	7.200	threading_8	-----------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVAQ-LASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKNNV-VITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVP-
9	MUSTER	2j58A	0.117	0.790	0.686	threading_9	VSQVRQDITSRLTVDVSIAAFRSQKVYVTGEANSGKQAITNIPLTVDAINAAGLAADADWRNVVLTHN--------------------------------------------GKDTKISLY-ALQKGDLTQNHLLYHGDILFIPSNDDLKVFVGEVGKQSTLKD-RSGTLAEALGNAEGIQESDATGIFVVRQLGKIADIYQLAVLGTEFQLQPYDIVYVTTAP------LVRWNRVISQLVPTISGV
10	SPARKS	2j58a	0.116	0.802	1.221	threading_10	VSQVRQDITSRLTTYIESPQVAFRSQKVYVTGESGKQAITNIPLTVDAINAAGGLAA-------------------------------DADWRNVV-------------LTHNGKDTKISLYALQKGDLTQNHLLYHGDILFIPSNDDLKVFVGEVGKQSTLKD-RSGTLAEALGNAEGISESDATGIFVVRRTGKIADIDASAVLGTEFQLQPYDIVYVTTAPSQLVPTISGVDTETVRYIKR----

Predicted Tertiary Structure


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TM-score=0.437 to 2qsbA SCOP code=a.29.14.1	TM-score=0.437 to 2qsbA SCOP code=a.29.14.1	TM-score=0.435 to 2qsbA SCOP code=a.29.14.1	TM-score=0.438 to 2qsbA SCOP code=a.29.14.1	TM-score=0.437 to 2qsbA SCOP code=a.29.14.1