Template-based Modeling Results for GATR_ECOLI

Submitted Primary Sequence

>Length 259
MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDAVSEVDKLALQKTRVKLITV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDAVSEVDKLALQKTRVKLITV
CCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCEEEEECCEEECCCCCEECHHHHHHHHHCCCCEEEEECCEECCCCCCCCCCHHHHHHHHHHHHHCEEEEEEECCCCCCEEEEEEECHHHCCEEEECCCCCHHHHHHHHHCCCEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDAVSEVDKLALQKTRVKLITV
5522222012200210352220203200320201211021003102531100101100011222223232322113222211121121002001400331100001000001100200232330100000020011014233010000101013323001021012003202000000001001122101112201001010021021000001013122200000010330100001320232012003524210012
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDAVSEVDKLALQKTRVKLITV
1	SPARKS	2w48a	0.174	0.911	1.255	threading_1	--SDDIRLIVKIAQLYYEQD-MTQAQIARELGIYRTTISRLLKRGREQGIVT------IAINYDYNENLWLEQQLKQKFGLEEEQLSAMGQHGALLVEPGDIIGFSWGRAVRSLVENLPQRRQVICVPHVNTLTYGAAARDSLDVALVGGSPAIRDGAFYGSEESDDLNARHV-AGDICSRFYDINGGLVDTNMSEKTEMAKLRQARYSIGIA-MGEEKYSGILGALHGRYINCLVTN----RETAELLLK--------
2	PROSPECT2	2w48A	0.120	0.965	1.725	threading_2	SD---DIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVTIAINY------DYNENLWLEQQLKQKFGLEEEQLSAMGQHGALLLEPGDIIGFSWGRAVRSLVENLPQSRQVICVPHVNTLTYGAAARLKAESHLADFPALLDNPLMQSQHFKTISSYWDLDVALVGIGSPAIRDGANWHAFYGSEESDDLNARHVAGDICNGGLVDTNMSEKTLKLRQARYSIMGEEKYSGILGALHGRYINCLVT
3	PPA-I	1uj5A	0.171	0.587	1.309	threading_3	-------------------------------------------------------------------------------RPLESYKKEAAHAAIAYVQDGMVVGLGTGSTARYAVLELAELKGVVGVPTSRATEELAKRE--------GIPLVDLPPE-------------GVDLAIDGADEIAPGLALKGMGGALLREKIVERVAKEFIVIADHTKKVP-------VLGRGPPVEIVPFGYRATLKAIADLGGEPELR
4	SPARKS	1vb5a	0.179	0.861	1.064	threading_4	----LPERVLEILREMKREAKKGAEAFLTLAELDESLLEDAIMELREE--VVKVNYNLARFIPVTNRRDILKSRALEFLRRMEEAKRELASIGAQLIDDGDVIITSFSSTVLEIIRTAKEKKRFKVILEGLHLARELEFS-GIEFEVI---------------TDAQMGLFEASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAETYKFHPTLLFDVTPWKYVRGIITELGIPRDI--------------
5	HHPRED-l	3rrl_B	0.213	0.633	3.408	threading_5	-------------------------------------------------------------------------------------REAIIKRAAKELKEG-YVNLGIGLPT-LVANEVSG--NIVFQSENGLLGYPLEGSVDADLINAGKEVVPGASFFNSADSFA-IRGGHIDLAILGG-EVSQNGDLAN-IPKKLIK-DLVHGAKKVIVI-EHCNKGESKVKKECSLGVVHQLITDLAVFEFLDQVKEKTEAEFEV-
6	SP3	2w48a	0.138	0.954	1.034	threading_6	--SDDIRLIVKIAQLYYEQD-MTQAQIARELGIYRTTISRLLKRGREQGIVT------IAINYDYNENLWLEQQLKQKFGLKEEQLSAMGQHGALLVEPGDIIGFSWGRAVRSLVENLPQRRQVICVPHVNTLTYGAAARLKAESHLADFPALLDNNGIMQQHFKTISSYWSLDVALVGIGSPAIRDGAN---WHAFYGSEESDDLNARHVAGDIDINGGLVDTNMIEMAKLRYSIGGEEKYSGILGALHGRYINCLVT
7	HHPRED-g	3rrl_B	0.201	0.633	3.268	threading_7	-------------------------------------------------------------------------------------REAIIKRAAKELKEG-YVNLGIGLPT-LVANEVS-G-NIVFQSENGLLGYPLEGSVDADLINAGKEVVPGASFFNSADSFA-IRGGHIDLAILGG-EVSQNGDLANW-PKKLIK-DLVHGAKKVIVI-EHCNKGESKVKKECSLGVVHQLITDLAVSLDQVKEKTEAEFEVRL-
8	SAM-T99	1i1gA1	0.229	0.185	1.316	threading_8	----IDERDKIILEILEKDARTPFTEIAKKLGISETAVRKRVKALEEKGIIE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	SP3	1ks2a1	0.229	0.506	1.166	threading_9	--------------------------------------------------------------------------------TQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTGQIEGAVSSSDASTEKLKSL--------GIHVFD-------------LNEVSLGIYVDGADEINGH--QIKGGGAALTREKIIAVAEKFICIADASKQ-------------VDIL-ANRGAD-----------VALIGT
10	MUSTER	2w48B	0.167	0.880	0.770	threading_10	-NSDDIRLIVKIAQLYYEQD-MTQAQIARELGIYRTTISRLLKRGREQGILKQKFG-AVVASSDGLL--------------EEEQLSAMGQHGALLVEPGDIIGFSWGRAVRSLVENLPQRRQVICVPHVNTLTYGAAARDSLDVALVGGSPAIRDGAFYGSEESDDLNARHV-AGDICSRFYDINGGLVDTNMSLSIEMAKLRQARYSIGIA-MGEEKYSGILGALHGRYINCLVTN----RETAELLLK--------

Predicted Tertiary Structure


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TM-score=0.623 to 2gnpA SCOP code=c.124.1.8	TM-score=0.646 to 2gnpA SCOP code=c.124.1.8	TM-score=0.546 to 1uj5A SCOP code=c.124.1.4	TM-score=0.787 to 1vb5B SCOP code=c.124.1.5	TM-score=0.634 to 2nrcB SCOP code=c.124.1.3