Template-based Modeling Results for FLIR_ECOLI

Submitted Primary Sequence

>Length 261
MLQVTSEQWLSWLNLYFWPLLRVLALISTAPILSERSVPKRVKLGLAMMITFAIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEIIGLQMGLSFATFVDPASHLNMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIGGEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGFPLTLTVGISLMAALMPLIAPFCEHLFSEIFNLLADIISELPLI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLQVTSEQWLSWLNLYFWPLLRVLALISTAPILSERSVPKRVKLGLAMMITFAIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEIIGLQMGLSFATFVDPASHLNMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIGGEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGFPLTLTVGISLMAALMPLIAPFCEHLFSEIFNLLADIISELPLI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLQVTSEQWLSWLNLYFWPLLRVLALISTAPILSERSVPKRVKLGLAMMITFAIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEIIGLQMGLSFATFVDPASHLNMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIGGEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGFPLTLTVGISLMAALMPLIAPFCEHLFSEIFNLLADIISELPLI
433111310110000000000000000000000133101210100000000000010022231211101000000110000000000010000002000200010100110211112232211100200000000000001000000110020010001112111130010002000200100010000000000001001000121032010100000010000000000001100200220012002000200320223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLQVTSEQWLSWLNLYFWPLLRVLALISTAPILSERSVPKRVKLGLAMMITFAIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEIIGLQMGLSFATFVDPASHLNMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIGGEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGFPLTLTVGISLMAALMPLIAPFCEHLFSEIFNLLADIISELPLI
1	PROSPECT2	3a0oA3	0.106	0.973	1.437	threading_1	RLWLNSEQLRQMYIDCQEVIYAIRHLAIAGRVLGR---DDLLDASRKWLLAVAAWDTKGATSRAYNDEAGFRVVVALAWGYDWLYERRTVRSVLLERTREVADHVIA----HARIHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLTDGGWAEGPHYWMTGMAYLIEAANLIRSYIYDLYQRPFFQNTGRFPLYTKAPSTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADLNFDDLVYRHDYPQV
2	PPA-I	3g61A1	0.077	0.996	1.105	threading_2	FRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFG-DMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHNQEIGVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTV
3	PROSPECT2	1xm9A	0.100	1.000	1.418	threading_3	LLRSPNQNVQQAAAGALRNLVKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLRNLLIDSLMAYVQNCVAASVENCMCVLHNLRYRQLEYNALPEEETNPKGSGWLYHSDAIRTYLNLSKKDATLEACAGALQNLTASKGLMSSGMSQLIGDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFPKAAEAARLLLSDMGVL
4	PPA-I	1wa5C1	0.109	0.881	1.014	threading_4	VIASTAKTSERNLRQLETQ---DGFGLTLLHVIASTNLPLSTRLAGALFFKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDF-----------PDRWPTLLSDLASRL------SNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTAPFLNLLKTVDEQIT-----------ANEKASLNILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMGIFHKYLSYNPLL
5	PROSPECT2	2bkuB2	0.091	0.966	1.415	threading_5	DENQLTLEDAQSLQELQSNILTVLAMGLFFRLLEKKDSA-FIEDDVFYAISALAASL-------GKGFEKYLETFSPYLLKALSITAVGFIADISNSLEEDFRRYSDMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGPEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMDWVIDYIKRTKDTARWAREQQKRQLSL-
6	PROSPECT2	3a6pA1	0.096	1.000	1.357	threading_6	AMDQVNALCEQLVKAVTVMMVRHFGLLIANGTLNILEEENHIKDALSRIVVEMIKREWPQHKQGETQTELVMFILLRLAEDVIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAHITAENCKLLEILCLLLNEQELSRKGKLEDRKPLMVLFGDVAMHYILSAAQTYVFLKRLCQVLCALGNQLTPSNFGKYLESFLAFTLRSSTQMTWGALFDPLLLAIIPKYLRASMTNLVKMGFP
7	PROSPECT2	3ibvA1	0.112	0.927	1.329	threading_7	M---SAQDVENAVEAAFIGSLRSSGWKICHEIFEKTKYKPSTRLICLQTLSEKVRE--WNNESNLLELQMIRDSVWSYIKELSFLDEPAYISNAVQHLLTLLFLQL----------YPSNWNDFFASLQGVIAASSQSEF--SNFYLKVLLSIGDEIADSLVLKTDVQIQKDNLVKDAIRANDMSDIVSFVYEMMTVGLCLQVYAQWVSWININLIVNE--PCMNLLYSFLQIEELRCAACETMTEIVLEKLNLLNILNLN
8	MUSTER	3zuxA	0.096	0.962	0.808	threading_8	I----LSKISSFIGKTFSLWAALFAAAAFFPDTFKWAGP-----YIPWLLGIIMFGMLKPSDFDILPKVVIIGVIAQFAIMPATAWCLSKLLAEIAVGVILVGCTASNVMTYLARGNVAL-STLTSPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMVPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGMQNSGLAAALAPVV
9	SPARKS	2xwub	0.124	0.962	0.960	threading_9	LIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHPELSVSSVSTLKKICRECKYDLPPAANIVAVSQDVLMKQIHSQCMWLMQALGFLLSALQVEEILKNLHSLISPEEIPNPSNKLAIVHILGLLSNLFTNPVVVVLQQVFQLIQKV-LSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPM--VPQLCEMLGRMYST-IPQ------ASALDLTRQLVHIFAHEPAHFPPIEALFLLVTSVTLTLFQQGPRD
10	PROSPECT2	1yq7A	0.076	0.962	1.315	threading_10	DEPEIGDAIARLKEVLEYNANRGLTVVVAFRELVEKQDADSLQRAWTVGWCVELLICWYQKPGVGLDAINDANLLEACIYRLLKLYCYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYM------AGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFWLVVQCLPEQYQILKENYGQKE----AEKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPIY

Predicted Tertiary Structure


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TM-score=0.516 to 2onjA SCOP code=c.37.1.12	TM-score=0.621 to 1j0nA SCOP code=a.102.3.2	TM-score=0.504 to 1l8dA SCOP code=h.4.12.1	TM-score=0.681 to 1xm9A SCOP code=a.118.1.24	TM-score=0.893 to 1wa5C SCOP code=a.118.1.1