Template-based Modeling Results for FEAR_ECOLI

Submitted Primary Sequence

>Length 301
MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEECCEEEEECHHHHCCCCCCEEEEEEEECCEEEEEECCEEEEECCCEEEEECCCCCEEEEECCCCEEEEEEECHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR
5431233113200200030002121312233020001000021010010101101011123203123211000000021201021341202012010000102210001023202000000122002210233321013203221200200120022013222123210200020000001101233322423233102100100141043320202100120100120012002332110120011100200021033123322000001301121111001001421311122125325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR
1	MUSTER	3gbgA	0.144	0.831	1.798	threading_1	----------------------------------------KKSFQTNVYRMSKDTYIFNNLYI-----NDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLTENINVSVITISDSFIRSLKSYILNKDLLLWNCEHNDIAVLSEVVNGF-REINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLD--AMEKISCLVKSDITRN-WRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGE--FKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLT
2	SPARKS	3gbga	0.143	0.834	3.104	threading_2	----------------------------------------KKSFQTNVYRMSKFDTYI----FNNLYINDYKMFWIDSGIAKLIDKLVSYEINSSSIILLKKNSIQRFSLTENINVSVITISDSFIRSLKSYILGNKDLLWNCEHNDIAVLSEVVNGF-REINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLD--AMEKISCLVKSDITRN-WRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTG--EFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLT
3	PROSPECT2	3gbgA	0.139	0.837	2.867	threading_3	----------------------------KKSFQTNVYRMSKFDTYIFNNLY----------------INDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLDENINVSVITISDSFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEK--KYNSIFITDDLDAMEKISCLVKSDITRN-WRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTG--EFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLT
4	PPA-I	3gbgA	0.147	0.837	2.136	threading_4	----------------------------------------KKSFQTNVYRMSKFDTYI----FNNLYINDYKMFWIDSGIAKLIDCLVSYEINSSSIILLKKNSIQRFSLTENINVSVITISDSFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLD--AMEKISCLVKSDITRN-WRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGE--FKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLT
5	HHPRED-l	3gbg_A	0.154	0.817	3.968	threading_5	------------------------------K----------KSFQTNVYRMSKFDTYI----FNNLYINDYKMFWIDSGIAK-LIDKVSYEINSSSIILLKKNSIQRFSLDENINVSVITISDSFIRSLKSYILG---DLLNCEHNDIAVLSEVVNGFREIN-YSDEFLKVFFSGFFSKVEKKYNS--IFITDDLDAMEKISCLVKSDITR-NWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKT--GEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFML-
6	HHPRED-g	3gbg_A	0.163	0.794	3.754	threading_6	------------------------------------------KKSFQTNVYDTYIFNN-------LYINDYKMFWIDSGIAK-LIDKVSYEINSSSIILLKKNSIQRFSLDENINVSVITISDSFIRSLKSYI-----DLLNCEHNDIAVLSEVVNGFREI-NYSD---EFLKVFFSGFFSKVEKKYNIFITDDLDAMEKISCLVKSDITR-NWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTG--EFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLT
7	SP3	3gbga	0.143	0.834	2.970	threading_7	----------------------------------------KKSFQTNVYRMSKF----DTYIFNNLYINDYKMFWIDSGIAKLIDKNVSYEINSSSIILLKKNSIQRFSLTENINVSVITISDSFIRSLKSYILGNKDLLWNCEHNDIAVLSEVVNGF-REINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLD--AMEKISCLVKSDITRN-WRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTG--EFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLT
8	SAM-T99	3oioA	0.326	0.306	2.637	threading_8	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEANIEEP-LSTDDIAYYVGVSRRQLERLFKQYGTVPSKYYLELRLNRARQLLQQT--SKSIVQIGLACGFSSGPHFSSTYRNHFNITPREERAQ--
9	MUSTER	2k9sA	0.226	0.352	0.936	threading_9	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQGISVLSWREDQRISQAKLLLSTT--RMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE
10	SPARKS	2k9sa	0.226	0.352	1.974	threading_10	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQGISVLSWREDQRISQAKLLLSTT--RMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE

Predicted Tertiary Structure


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TM-score=0.467 to 1xjaC SCOP code=b.82.4.1	TM-score=0.471 to 1d5yA SCOP code=a.4.1.8	TM-score=0.474 to 1d5yA SCOP code=a.4.1.8	TM-score=0.472 to 1xjaC SCOP code=b.82.4.1	TM-score=0.469 to 1xjaC SCOP code=b.82.4.1