Template-based Modeling Results for CPXR_ECOLI

Submitted Primary Sequence

>Length 232
MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDSIDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGTEFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWFKTLRGRGYLMVSAS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDSIDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGTEFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWFKTLRGRGYLMVSAS
CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEECCCEEEEECCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDSIDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGTEFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWFKTLRGRGYLMVSAS
4410000212420020022004221110000210320021033210000000101432002002001423400000000311320100002000101002101130000001100221232333333332210020220101122110113322020102101001000311221011310012012230221210010001101520444442211010011100102335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDSIDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGTEFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWFKTLRGRGYLMVSAS
1	MUSTER	2oqrA	0.391	0.970	3.870	threading_1	ATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDS----EMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE---
2	SPARKS	1ys6a	0.386	0.961	3.943	threading_2	SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATNRPDAIVLDINMPVLDGVSVVTALRAMNDVPVCVLSARVD--DRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGS-----TATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGG-GPRLLHTVRGVGFVLRMQ-
3	PROSPECT2	2oqrA	0.387	0.970	4.658	threading_3	ATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG----DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKL---E
4	PPA-I	2oqrA	0.391	0.970	4.477	threading_4	ATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD----DDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE---
5	HHPRED-l	2gwr_A	0.397	0.922	3.162	threading_5	-RRILVVDDDASLAE-LTIVLRGEGFDTAVIGDGTQALTAVRLRPDLVLLDL-LPG-NGIDVCRVLRADSGVPIV-LTAKTDTVDVVLGLESGADDYI-KPFKPKELVARVRARLRRNDD--------EPAE-LSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYR--ADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP-
6	HHPRED-g	2gwr_A	0.397	0.922	2.662	threading_6	-RRILVVDDDASLAE-LTIVLRGEGFDTAVIGDGTQALTAVRLRPDLVLLDL-LPG-NGIDVCRVLRADSGVPIV-LTAKTDTVDVVLGLESGADDYI-KPFKPKELVARVRARLRRNDD--------EPAE-LSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYR--ADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP-
7	SP3	1ys6a	0.386	0.961	3.728	threading_7	SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATNRPDAIVLDINMPVLDGVSVVTALRAMNDVPVCVLSARVD--DRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGS-----TATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGG-GPRLLHTVRGVGFVLRMQ-
8	SAM-T99	2oqrA	0.387	0.970	3.545	threading_8	ATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG----DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE---
9	MUSTER	1p2fA	0.297	0.914	3.603	threading_9	-WKIAVVDDDKNILKKVSEKLQQLG-RVKTFLTGEDFLND-EEAFHVVVLDVL-PDYSGYEICRIKETRPETWVILLTLLSDDESVLKGFEAGADDYVTKPFNPEILLARVKRFLER-----------EKKGLYDFGDLKIDATGFTVFLKGKRIHLPKKEFEILLFLAENAGKVVTREKLLETFWEDPV--SPRVVDTVIKRIRKAIEDDPNRPRYIKTIWGVGYFTG---
10	SPARKS	2gwra	0.395	0.927	3.659	threading_10	RQRILVVDDDASLAE-LTIVLRGEGFDTAVIGDGTQALTAVRLRPDLVLLD-LLPG-NGIDVCRVLRADSGVPIVL-TAKTDTVDVVLGLESGADDYI-KPFKPKELVARVRARLRRN---------DDEPAELSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYR--ADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP-

Predicted Tertiary Structure


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TM-score=0.600 to 1ys6B SCOP code=a.4.6.1	TM-score=0.601 to 1ys6B SCOP code=a.4.6.1	TM-score=0.936 to 1ys6B SCOP code=a.4.6.1	TM-score=0.598 to 1ys6B SCOP code=a.4.6.1	TM-score=0.604 to 1ys6B SCOP code=a.4.6.1