Template-based Modeling Results for CPDB_ECOLI

Submitted Primary Sequence

>Length 647
MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDIHPVYKALNTLDYTVGTLGNHEFNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDTEVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGADVVVVLAHSGLSADPYKVMAENSVYYLSEIPGVNAIMFGHAHAVFPGKDFADIEGADIAKGTLNGVPAVMPGMWGDHLGVVDLQLSNDSGKWQVTQAKAEARPIYDIANKKSLAAEDSKLVETLKADHDATRQFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQGDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMINANAERIKNLTFNGKPIDPNAMFLVATNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWIADESKRAGEIHPAADNNWRLAPIAGDKKLDIRFETSPSDKAAAFIKEKGQYPMNKVATDDIGFAIYQVDLSK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDIHPVYKALNTLDYTVGTLGNHEFNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDTEVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGADVVVVLAHSGLSADPYKVMAENSVYYLSEIPGVNAIMFGHAHAVFPGKDFADIEGADIAKGTLNGVPAVMPGMWGDHLGVVDLQLSNDSGKWQVTQAKAEARPIYDIANKKSLAAEDSKLVETLKADHDATRQFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQGDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMINANAERIKNLTFNGKPIDPNAMFLVATNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWIADESKRAGEIHPAADNNWRLAPIAGDKKLDIRFETSPSDKAAAFIKEKGQYPMNKVATDDIGFAIYQVDLSK
CHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCEEEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCHHHHHHCCCCCCCEECCCCCCCCCCCCCEEHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCCCCCEEEECCCCEEEEEEECCEECCCCCEEEEEECCHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCHHHCCCCCCCCCCCCEECCCCCCCEEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDIHPVYKALNTLDYTVGTLGNHEFNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDTEVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGADVVVVLAHSGLSADPYKVMAENSVYYLSEIPGVNAIMFGHAHAVFPGKDFADIEGADIAKGTLNGVPAVMPGMWGDHLGVVDLQLSNDSGKWQVTQAKAEARPIYDIANKKSLAAEDSKLVETLKADHDATRQFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQGDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMINANAERIKNLTFNGKPIDPNAMFLVATNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWIADESKRAGEIHPAADNNWRLAPIAGDKKLDIRFETSPSDKAAAFIKEKGQYPMNKVATDDIGFAIYQVDLSK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDIHPVYKALNTLDYTVGTLGNHEFNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDTEVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGADVVVVLAHSGLSADPYKVMAENSVYYLSEIPGVNAIMFGHAHAVFPGKDFADIEGADIAKGTLNGVPAVMPGMWGDHLGVVDLQLSNDSGKWQVTQAKAEARPIYDIANKKSLAAEDSKLVETLKADHDATRQFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQGDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMINANAERIKNLTFNGKPIDPNAMFLVATNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWIADESKRAGEIHPAADNNWRLAPIAGDKKLDIRFETSPSDKAAAFIKEKGQYPMNKVATDDIGFAIYQVDLSK
1	MUSTER	3qfkA	0.245	0.756	2.715	threading_1	---------------------SNIAFYVVSDVHGYIFPTDFTSRNQY-QPGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIA---HSGSSQPLVDFYNR-AFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDS-TLTDNGVKYFQVG---------DQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEKR--HADIIVVCYHGGFEKDTEVLTGENEGYLEAFSKDIDIFITGHQHRQIAER--------------FKQTAVIQPGTRGTTVGRVVLSTDEYEN---LSVESCELLPVIDDSTFTID--------EDDQHLRKQLEDWLDYEITTLPYDTHAFEARVAPHPFTNFNYALLEKS--------ADVACTALFDSASGF-----------------KQVVTRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFLEP-KPQHFNYDIYGGVSYTIHVGRPK------------GQRVSNI--QGHAVDLKQTYTICVNNYRAVGGGQYDYIDAPVVKDIQVEGAQLLIDFLSNN----NLRIPQV-VDFKVEK--------------------------------------------------
2	SPARKS	3qfka	0.247	0.757	7.560	threading_2	---------------------SNIAFYVVSDVHGYIFPTDFTSRNQY-QPGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIA---HSGSSQPLVDFYNR-AFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDS-TLTDNGVKYFQV---------GDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEKR--HADIIVVCYHGGFEKDLESLTGENEGALEAFSKDIDIFITGHQHRQIA--------------ERFKQTAVIQPGTRGTTVGRVVLSTDEYEN---LSVESCELLPVIDDSTFTID--------EDDQHLRKQLEDWLDYEITTLPYDTHAFEARVAPHPFTNFN-YALLEKS------DADVACTALFDSASGF-----------------KQVVTRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFLE-PKPQHFNYDIYGGVSYTIHVGRPK------------GQRVSNI--QGHAVDLKQTYTICVNNYRAVGGGQYDYIDAPVVKDIQVEGAQLLIDFLSN----NNLRIPQVV-DFKVEK--------------------------------------------------
3	PROSPECT2	3qfkA	0.235	0.757	4.805	threading_3	S---------------------NIAFYVVSDVHGYIFPTDFTSRNQYQ-PGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAH---SGSSQPLVDFYN-RAFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYE-NDSTLTDNGVKYFQV---------GDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEK--RHADIIVVCYHGGFEKDLESGGENEGYALEAFSKDIDIFITGHQHRQIAE--------------RFKQTAVIQPGTRGTTVGRVVLSTDEYENLSVESCELLPV-----------IDDSTFTIDEDDQHLRKQLEDWLDYEITTLPYDTIAFEARVAPHPFTNFNYALLEKS-------DADVACTALFDSASGF-----------------KQVVTRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFLE-PKPQHFNYDIYGGVSYTIHVGRPK------------GQRVSNI--QGHAVDLKQTYTICVNNYRAVGGGQYDYIDAPVVKDIQVEGAQLLIDFLSN----NNLRIPQVV-DFKVE--------------------------------------------------K
4	PPA-I	3qfkA	0.237	0.757	4.218	threading_4	---------------------SNIAFYVVSDVHGYIFPTDFTSRNQY-QPGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIA---HSGSSQPLVDFYN-RAFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDS-TLTDNGVKYFQVG---------DQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEK--RHADIIVVCYHGGFEKDLESGGENEGYALEAFSKDIDIFITGHQHRQIA--------------ERFKQTAVIQPGTRGTTVGRVVLSTDEYEN---LSVESCELLPVIDDSTFTID--------EDDQHLRKQLEDWLDYEITTLPYDTHAFEARVAPHPFTNFNYALLEKSD-------ADVACTALFDSASGF-----------------KQVVTRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFL-EPKPQHFNYDIYGGVSYTIHVGRPK------------GQRVSNI--QGHAVDLKQTYTICVNNYRAVGGGQYDYIDAPVVKDIQVEGAQLLIDFLSNN----NLRIPQVV-DFKVEK--------------------------------------------------
5	HHPRED-l	3qfk_A	0.241	0.751	5.383	threading_5	---------------------SNIAFYVVSDVHGYIFPTDFTSRNQYQP-GLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLI---AHSGSSQPLVDFYNR-AFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIY-EN-DSTLTNGVKYFQV---------GDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPE-KRH-ADIIVVCYHGGFEKDLESGTGENGYA-LEAFSKIDIFITGHQHRQIAER--------------FKQTAVIQPGTRGTTVGRVVLSTDEYE---NLSVESCELLPVID-------DS-TFTIDEDDQHLRKQLEDWLDYEITTLPYD-TAFEARVAPHPFTNF-NYALLEKSDADVA---------------------CTALFDS-ASGFKQVVT-RDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDV-KNDEVSVSADFLEPKPQHFNYDIYGGVSYTIHVGRPK------------GQRVSN--IQGHAVDLKQTYTICVNNYRAVGGQYD-YIDAPVVKDIQVEGAQLLIDFLSNN----NL-RIPQVVDFKVEK--------------------------------------------------
6	HHPRED-g	3qfk_A	0.243	0.750	4.427	threading_6	---------------------SNIAFYVVSDVHGYIFPTDFTSRNQYQP-GLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYL-IA--HSGSSQPLVDFYNR-AFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIY-EN-DSTLTNGVKYFQV-----GD----QTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPE-KRH-ADIIVVCYHGGFEKDLESLTGENEGYA-LAFSKIDIFITGHQHRQIAE--------------RFKQTAVIQPGTRGTTVGRVVLSTDEYE---NLSVESCELLPVID-------DS-TFTIDEDDQHLRKQLEDWLDYEITTLPYD-HAFEARVAPHPFTNF-NYALLEKS-----D-ADVA----------CTALFD-S-----ASGFKQVVT-RDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDV-KNDESVSADFLE-PKPQHFNYDIYGGVSYTIHVGRPK------------GQRVSN--IQGHAVDLKQTYTICVNNYRAVGGGYD-YIDAPVVKDIQVEGAQLLIDFLSN----NNL-RIPQVVDFKVEK--------------------------------------------------
7	SP3	3qfka	0.247	0.757	7.750	threading_7	---------------------SNIAFYVVSDVHGYIFPTDFTSRNQY-QPGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAH---SGSSQPLVDFYN-RAFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDS-TLTDNGVKYFQV---------GDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEKR--HADIIVVCYHGGFEKDLEVLTGENEGALEAFSKDIDIFITGHQHRQIA--------------ERFKQTAVIQPGTRGTTVGRVVLSTDEYEN---LSVESCELLPVID--------DSTFTIDEDDQHLRKQLEDWLDYEITTLPYDTHAFEARVAPHPFTNFN-YALLEKS------DADVACTALFDSASGF-----------------KQVVTRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFLEP-KPQHFNYDIYGGVSYTIHVGRPK------------GQRVSNI--QGHAVDLKQTYTICVNNYRAVGGGQYDYIDAPVVKDIQVEGAQLLIDFLSN----NNLRIPQVV-DFKVEK--------------------------------------------------
8	SAM-T99	3qfkA	0.253	0.733	4.920	threading_8	---------------------SNIAFYVVSDVHGYIFPTDFTSRNQ-YQPGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAH---SGSSQPLVDFYNR-AFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYE-NDSTLTDNGVKYFQVG---------DQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPE--KRHADIIVVCYHGGFEKDLESGTGENEGYALEAFKDIDIFITGHQHRQIAE--------------RFKQTAVIQPGTRGTTVGRVVLS----TDEYENLSVECELLPVID--------DSTFTIDEDDQHLRKQLEDWLDYEITTLPYDTHAFEARVAPHPFTNF-NYALLEKSDADV------------ACTALFDS----------ASGFKQVVT-RDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYF-DVKNDEVSVSADFLEPKPQHFNYDIYGGVSYTIHVGRPK------------GQRVSNIQ--GHAVDLKQTYTICVNNYRAVGGGQYDYIDAPVVKDIQVEGAQLLIDFLSN----------------------------------------------------------------------
9	MUSTER	2z1aA	0.222	0.759	2.624	threading_9	---------------------FTLTLVHTNDTHAHLEPVELTLSGEKTPGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGL--------ADRYFMHRLRYRAMALGNHEFDLGPGPLADFLKGARFKVVSANVDASREPRLLFAPYAVVVVG---------GERVGIIGLTTPDTREISNPG--PTVAFLDPYESAQKAVYELLAKGVNKIVVLSHLGY---------GEDLKLARRLVGVQVIVGGHSHTLLGSFPHKELSPAGVKNPEGKDVLVVQAWEWGKVVGLLEVTFD---AKGELLAYKGEALLMT-----PEAAPEDFFAKEALLAYAQPVMALMQQVIAEAKVDLVGERAVVRESNLGNLITDGMLWKTRN---------------AGTQI---ALQNGGGIRASIPKGPITVGKVYEVLPFGNTLVVMDLKGKEILAALENGVSQWEN-----------------TAGRFLQVSGLRYAFDLSRPA------------GSRVVRVEVKTVPLDLEATYRVVVNNFIANGGDGFTVEAQGYRVDTGFSDAESFMDYLKELK----VVEAGLEGRIEVLNEP------------------------------------------------
10	SPARKS	1ush_	0.203	0.770	6.678	threading_10	---------------YEQDKTYKITVLHTNDHHGHFWRNEY------GEYGLAAQKTLVDGIRKEVASVLLLSGGDINTGVPESDLQDA--------EPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKR---------QDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQEKPDIIIAATHMGHYDNGEGSNAPGDVEMARALPSLAMIVGGHSQDPVCKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFR--NGEMKMVNYQLIPVNLKKRVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRVRFVQTNMGRLILAAQMDRT------GADFA---------------VMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQM------------------KPDSGAYPQFANVSFVAK-----------------DGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDSVYEPKGEVSWQ-----------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.680 to 2z1aA SCOP code=d.114.1.1	TM-score=0.677 to 2z1aA SCOP code=d.114.1.1	TM-score=0.681 to 2z1aA SCOP code=d.114.1.1	TM-score=0.680 to 2z1aA SCOP code=d.114.1.1	TM-score=0.674 to 2z1aA SCOP code=d.114.1.1