Template-based Modeling Results for CLS_ECOLI

Submitted Primary Sequence

>Length 486
MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHCCEEEEEECCEEEECCEEECCHHHCCCCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHCEECCHHHHHHCCHHHHHHHHHHHHHHHHC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL
210001000100000000000000010013332122110000012112110100010001231123113203201220141021032033212432222012002002313201003111010012022003000310230331000000001211002100200120043102000001001012112210020034010100100312112111331112212100001020000000000122103332321110000000202001100100010011211331222222231122332221100000112222231002000100110311000001100011200200010032211000001232112000100100011003010200102111000100001110000000100010010101000001032002201210220134122021311341110220021001001211
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL
1	MUSTER	3hsiB	0.164	0.792	1.931	threading_1	------------------------------------------------------------------------------------------------INKTKRAEQNLNNLPFLAL-QAEQIEFLGSSAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQEHLDVKVLIDWHRAQRNKSATNADWYCEQRQTYQLPDDPNFFPINTREVFGVLHVKGFVFDDTVLYSGA-SINN-VYLHQFE--KYRYDRYQKITHAELADSVNFINDYLSAVYPLDVTNRPRTKEILKSAVKLPNVLSVSPLGLGASGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDKVANYLYESNLRRFCEKFETQIVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQLLAQVEKEQNQIRQHTKVLKLEELNQYPPVQKLLKKFARIKADKL
2	HHPRED-l	2o8r_A	0.126	0.767	4.902	threading_2	EDIIKEHLDVVFPGL------------------PDEVLRYICSSCDIDP----EEAIRSGNYVNLQD-----LA--LPNPFAPRLE--TLTPEPLLSKHLPSL-EG---------IRRKDY-LIHVPYYTYDYVVRLL-EAAIEIRLTQYRVAEN---SSIISALEAAAQSGKKVSVFVELKARF---NLRLSER-RRSGIRIVYS------------PGLKVHAKTALILYHIALLSTGNFNETT-------ARIYSDTTL-TANTDIHDVYRLFRILDGDPE-----PA-----------R----FSRLLVARYN-GEAITNLIEREIENVKRY-L---N-GLQDKNVITQLYRASEAGVEIDLIVRGICLVPD-P-QSRNLVD-YLEHS-RIWCFHNG---------GKEEVFISSADW-KRNLYNRIETACPVLDPTLRREIIDILEIQLRDACRIDSSNNIYKNRAQAIYRYLKGKTT---
3	HHPRED-g	2o8r_A	0.141	0.757	3.687	threading_3	DA---------------------PTRF-YDGR-PDEVLRYICSSCDIDPEE--AIRSGNYVNLQDLA------LPN-P--FAPRLETLTPEPLLSKHEQAPSL-EGIRR---------KD-YLIHVPYYTYDYVVRLL-EAAIEIRLTQYRVAEN---SSIISALEAAAQSGKKVSVFVELKA--RF-NLRLSER-RRSGIRIVY--S----------PGLKVHAKTALILYHAALLSTGNFNE-T------TARIYSDTTL-TANTDIHDVYRLFRILDGDPE-----PA-------R--------FSRLLVARYN-GEAITNLIEREIENVKRY-L---N-GLQDKNVITQLYRASEAGVEIDLIVPDQSRNIRVTR----LVD-YLEHS-RIWCFHNG---------GKEEVFISSADW-KRNLYNRIETACPVLDPTLRREIIDILEIQLRDNCRIDSSLNIYKHKPVRAQAAIYRYTT---
4	PROSPECT2	3q3eA	0.089	0.920	1.449	threading_4	TEKACSELLLILKIVYFCTRMATAITTLFSDPVLEISDLGVQRFLVYQRWLALIFASSPFVNADHILQTYTSTAFNKRATILQWFPRHLDQLKNLNNIPSAISHDVYMHCSYDTSVNKHDV-----KRALNHVIRRHIESENKPVMVVLLEFHSAHSIYRTHSTSMIAAREHFYLIGLGSPSVNMKQKLEFIRSVCESNGAAIFYMPSIGMDMTTIFASNTRLAPIQAIALGHPATTHSYVIVEDDYVGSEECFSE---TLLRLPKDA---------------LPYVPSALAPEKVDYLLRENPEVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAPHSPYHQYLRILHNNGIIDMVTLGLVGVCKTGAEVHEHI----------------DEGLFKRLGLPLIANTVDEYVERAVRLAENHQERLELRRYIIENNGLNTPMGQVFLEKLNAFL
5	SPARKS	3hsia	0.158	0.782	5.309	threading_5	----------------------------------------------------------------------------------------------------NKTKRAEQNLNNLPFLQAEQIEFLGSSAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQEHLDVKVLIDWHRAQRNLLATNADWYCEQRQTYQLPDDPNFVPINTREVFGVLHVKGFVFDDTVLYSGA-SINN-VYLH--QFEKYRYDRYQKITHAELANFINDYLLDFSAVYPLDVTNRPREYSLKSAVKLPNVLSVSPLFGLGASGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDKPEQPFKAGALPYLYESNLRRGVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQLLAQVEKEQNQIRQHTKVLK--HYTELEELNQYPEPVQKLLKKFA
6	PROSPECT2	3hsiA	0.154	0.790	4.054	threading_6	-------------------------------------------------------------------------------------------------NKTKRAEQNLNNLPFLAL-QAEQIEFLGSSAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQPHLDVKVLIDWHRAQRNLLATNADWYCEQRQTYQLPDDPNFVPINTREVFGVLHVKGFVFDDTVLY-SGASINN-VYLHQFE--KYRYDRYQKITHAELADINDYLLDFSAVYPLDVTNRPRGEYSLKSAVKLPNVLSVSPLFGLGASGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDPPEQPFKAGALPYLYESNLRRVVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQLLAQVEKEQNQIRQHTKVLKHYTLNQYPEVQKLLKKFARIKADKL
7	PPA-I	3hsiB	0.153	0.792	3.733	threading_7	------------------------------------------------------------------------------------------------INKTKRAEQNLNNLPFLAL-QAEQIEFLGSSAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQEHLDVKVLIDWHRAQRNLAEKNADWYCEQRQTYQLPDDPNFFPINTREVFGVLHVKGFVFDDTVLYSGA-SINNV---YLHQFEKYRYDRYQKITHAELADSVNFINDYLLDFSAVYPLDVTNRPRTKEAVKLPNVLSVSPLFGLGASGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDKVANESNLRRFCEKFETQIESGVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQLLAQVEKEQNQIRQHTKVLKLEELNQYPPVQKLLKKFARIKADKL
8	HHPRED-l	3hsi_A	0.160	0.770	7.492	threading_8	------------------------------------------------------------------------------------------------NKT-KRAEQNLNNL-PFLALQAEQIEFLGSSAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQEHLDVKVLIDWHNLL--ANDWYCEQRQTYQLPDDFFGV----PINTREVFGVLHVKGFVFDDTVLYSG-ASINNVYL-HQFE--KYRYDRYQKITHAELADS-VNFINDYLLDFSAVYDVPRILQNGEYSLKSAVKLPNVLSVSPLFSGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDKPEQPFK-AGALPYLYEQIESGVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQLLAQVEKEQNQIRQHTKVLKHYTENQYPEPVQKLLKKFARIK-I-
9	HHPRED-g	3hsi_A	0.168	0.770	7.080	threading_9	--------------------------------------------------------------------------------------------------NKTKRAEQNLNNLPFLALQAEQIEFLGSSAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQEHLDVKVLIDWHNLL--AADWYCEQRQTYQLPDDFFVPIN-----TREVFGVLHVKGFVFDDTVLYSG-ASINN-VYLHQFE--KYRYDRYQKITHAELADS-VNFINDYLLDFSAVYNRPRTKEALGEYSLKSAKLPNVLSVSPLFSGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDKPEQPFK-AGALPYLYESIESGVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQLLAQVEKEQNQIRQHTKVLKHYTELEYPEPVQKLLKADKLVK-IL
10	SP3	3hsia	0.157	0.786	5.630	threading_10	-------------------------------------------------------------------------------------------------NKTKRAEQNLNNLPFLA-LQAEQIEFLGSSAEFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQEHLDVKVLIDWHRAQRNLLATNADWYCEQRQTYQLPDDPNFVPINTREVFGVLHVKGFVFDDTVLYSGA-SINN-VYL--HQFEKYRYDRYQKITHAELANFINDYLLDFSAVYPLDVTNRPRGEYSLKSAVKLPNVLSVSPLGLGASGNELNQVIEDLFLQVQKKLVICTPYFNFPRTLQHKIATLLENGKRVEIIVGDPPEQYLYESNLRRFCEKFETQIVRLWRDGDNTYHLKGVWVDDRYILLTGNNLNPRAWRLDAENGLLIYDPQLLAQVEKEQNQIRQHTKVLK--HYTELEELNQYPEPVQKLLKKFA

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.598 to 1xdpA SCOP code=a.7.15.1	TM-score=0.711 to 1xdpA SCOP code=a.7.15.1	TM-score=0.590 to 1xdpA SCOP code=a.7.15.1	TM-score=0.726 to 1xdpA SCOP code=a.7.15.1	TM-score=0.517 to 2iw1A SCOP code=c.87.1.8