Template-based Modeling Results for CBPA_ECOLI

Submitted Primary Sequence

>Length 306
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
CCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHCCCCEEEEEEECCEECCCCCEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCEECCCEEEEEEECCHHHHHCCCEEEECCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
554210110010321132310130012003400112144330321021023003102133111201201422221312231221212112030021002101132133133322242310101020102211231212020202102221223231321020202210331220102121221332122000000010131320112220000101000120002120202114320202014213222201021310224433000001010201341333012002201422322223332244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
1	MUSTER	3lz8A	0.828	0.608	2.952	threading_1	-----------------------------------------------------------------------------------------------------------------AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGIE-SETPKTLNVKIPAGVVDGQRIRLKGQGTPG---GPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPTKPDEKARELWQQLAAAEASFDPRKTW---
2	SAM-T99	1bq0A	0.474	0.248	2.769	threading_2	-AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	SAM-T99	1hdjA	0.474	0.248	2.578	threading_3	-MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKGSG-------------------------------------------------
4	SPARKS	3lz8a	0.823	0.608	5.471	threading_4	-----------------------------------------------------------------------------------------------------------------AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGIESET-PKTLNVKIPAGVVDGQRIRLKGQGTPG---GPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPTKPDEKARELWQQLAAAEASFDPRKTW---
5	PROSPECT2	3lz8A	0.817	0.608	3.517	threading_5	-----------------------------------------------------------------------------------------------------------------AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGIESETP-KTLNVKIPAGVVDGQRIRLKGQGTPG---GPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPTKPDEKARELWQQLAAAEASFDPRKTW---
6	PPA-I	3lz8A	0.828	0.608	7.071	threading_6	-----------------------------------------------------------------------------------------------------------------AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGIE-SETPKTLNVKIPAGVVDGQRIRLKGQGTPG---GPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPTKPDEKARELWQQLAAAEASFDPRKTW---
7	HHPRED-l	3lz8_A	0.839	0.608	5.514	threading_7	-----------------------------------------------------------------------------------------------------------------AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFG-IESETPKTLNVKIPAGVVDGQRIRLKGQGTPG---GPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPTKPDEKARELWQQLAAAEASFDPRKTW---
8	HHPRED-g	3lz8_A	0.839	0.608	5.104	threading_8	-----------------------------------------------------------------------------------------------------------------AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFG-IESETPKTLNVKIPAGVVDGQRIRLKGQGTPG---GPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPTKPDEKARELWQQLAAAEASFDPRKTW---
9	SP3	3lz8a	0.823	0.608	4.197	threading_9	-----------------------------------------------------------------------------------------------------------------AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGIESET-PKTLNVKIPAGVVDGQRIRLKGQGTPG---GPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPTKPDEKARELWQQLAAAEASFDPRKTW---
10	SAM-T99	3lz8A	0.823	0.608	4.804	threading_10	-----------------------------------------------------------------------------------------------------------------AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGIESE-TPKTLNVKIPAGVVDGQRIRLKGQGTPG---GPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPTKPDEKARELWQQLAAAEASFDPRKTW---

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.625 to 1c3gA SCOP code=b.4.1.1	TM-score=0.596 to 1bq0A SCOP code=a.2.3.1	TM-score=0.626 to 1c3gA SCOP code=b.4.1.1	TM-score=0.602 to 1hdjA SCOP code=a.2.3.1	TM-score=0.626 to 1c3gA SCOP code=b.4.1.1