Template-based Modeling Results for BASS_ECOLI

Submitted Primary Sequence

>Length 363
MHFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQIQLFEQALRDNRNNDRHIMREIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQKELEARTADNLTPIAIHSATLEIEAVVSALNDLVSRLTSTLDNERLFTADVAHELRTPLAGVRLHLELLAKTHHIDVAPLVARLDQMMESVSQLLQLARAGQSFSSGNYQHVKLLEDVILPSYDELSTMLDQRQQTLLLPESAADITVQGDATLLRMLLRNLVENAHRYSPQGSNIMIKLQEDDGAVMAVEDEGPGIDESKCGELSKAFVRMDSRYGGIGLGLSIVSRITQLHHGQFFLQNRQETSGTRAWVRLKKDQYVANQI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MHFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQIQLFEQALRDNRNNDRHIMREIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQKELEARTADNLTPIAIHSATLEIEAVVSALNDLVSRLTSTLDNERLFTADVAHELRTPLAGVRLHLELLAKTHHIDVAPLVARLDQMMESVSQLLQLARAGQSFSSGNYQHVKLLEDVILPSYDELSTMLDQRQQTLLLPESAADITVQGDATLLRMLLRNLVENAHRYSPQGSNIMIKLQEDDGAVMAVEDEGPGIDESKCGELSKAFVRMDSRYGGIGLGLSIVSRITQLHHGQFFLQNRQETSGTRAWVRLKKDQYVANQI
CCHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MHFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQIQLFEQALRDNRNNDRHIMREIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQKELEARTADNLTPIAIHSATLEIEAVVSALNDLVSRLTSTLDNERLFTADVAHELRTPLAGVRLHLELLAKTHHIDVAPLVARLDQMMESVSQLLQLARAGQSFSSGNYQHVKLLEDVILPSYDELSTMLDQRQQTLLLPESAADITVQGDATLLRMLLRNLVENAHRYSPQGSNIMIKLQEDDGAVMAVEDEGPGIDESKCGELSKAFVRMDSRYGGIGLGLSIVSRITQLHHGQFFLQNRQETSGTRAWVRLKKDQYVANQI
442232222113200100000111031121111122112102101311223321222012201200001000000000000000010012102001301210232133312202243122101200100130022023012112200010022010000002210110242322202201220220120012002003023222223223031022002100220121034332201022222201020012001100100020004101420101010223320000011212201321012002000212232200000000002003115020101114332001010102333322344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MHFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQIQLFEQALRDNRNNDRHIMREIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQKELEARTADNLTPIAIHSATLEIEAVVSALNDLVSRLTSTLDNERLFTADVAHELRTPLAGVRLHLELLAKTHHIDVAPLVARLDQMMESVSQLLQLARAGQSFSSGNYQHVKLLEDVILPSYDELSTMLDQRQQTLLLPESAADITVQGDATLLRMLLRNLVENAHRYSPQGSNIMIKLQEDDGAVMAVEDEGPGIDESKCGELSKAFVRMDSRYGGIGLGLSIVSRITQLHHGQFFLQNRQETSGTRAWVRLKKDQYVANQI
1	MUSTER	3dgeA	0.255	0.606	1.557	threading_1	----------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVD-LCDLVESAVNAIKEFASSHNVNVLFESNPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKDGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLPGTGLGLAITKEIVELHGGRIWVESEV-GKGSRFFVWIPKDRA-----
2	PROSPECT2	1jm6a	0.123	0.871	2.728	threading_2	ASLAGAPKYIEHFS----------------------KFSPSPLSMKQFLDFGACEKTSFTFLRQELPVRLANIMKEILPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPED------------------------HRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYDPVSNYFLDRFYLSRISIRMLINQHTLIFDPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQNATQPIHMVYVPSHLYHMLFELFKNAMRASLTLPPIKIMVALGEELSIKMSDRGGGVPLRKIERLFSYMYSTAPTPAGFGYGLPISRLYAKYFQGDLQLFSME-GFGTDAVIYLKALSTDSVER
3	SPARKS	2c2aa	0.253	0.620	3.988	threading_3	-----------------------------------------------------------------------------------------------------------------------------MVTESKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVD-LCDLVESAVNAIKEFASSHNVNVLFESNVPPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD-----TGLGLAITKEIVELHGGRIWVESEV-GKGSRFFVWIPKDR------
4	MUSTER	3a0rA	0.208	0.835	1.504	threading_4	--FSESILSLETAIITL------DGRIT----EWNKKAEQLF-----LKKENVLGRRLFEEIGSVAESVFENK----------------------EPVFLNFYKFGERYFSPFRNAKTQL-LEGVIITIDDV--KRRERLSILGEMTARVAHEIRNPITIIGGFIMRMKKTLKKYINIITNELSRLETIVKEILEYSKERV----LEFTEFN-LNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDMYTVRVSVWNSGPPIPEELKEKIFSPFF--------TTLGLSICRKIIEDEGGKIWTENRE--NGVVFIFEIPKTPEKR---
5	PPA-I	3dgeA	0.255	0.606	2.644	threading_5	----------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVD-LCDLVESAVNAIKEFASSHNVNVLFESNVPPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKDGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLPGTGLGLAITKEIVELHGGRIWVESEV-GKGSRFFVWIPKDRA-----
6	PROSPECT2	1y8nA	0.147	0.843	2.613	threading_6	PKQIERYSRF------------------------SPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLDNLLNRPSVGLVQSWYMQSFLELLEYENKSPED---------------------------PQVLDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHIGSIDVADVVKDAYETAKMLCEQYYLEFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRAKEGYPAVKTLVTLGKELSIKISDLGGGVPLRKIDRLFNYMYS-----PLFGYGLPISRLYARYFQGDLKLYSME-GVGTDAVIYLKALSSESFER
7	HHPRED-l	2c2a_A	0.247	0.625	4.617	threading_7	-------------------------------------------------------------------------------------------------------------------MENVTES--------KELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSDKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVD-LCDLVESAVNAIKEFASSHNVNVLFESNVCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD-----TGLGLAITKEIVELHGGRIWVESEV-GKGSRFFVWIPKDR------
8	SAM-T99	3a0rA	0.204	0.730	3.590	threading_8	----------------------------------------------VAESVFENKEPVFLNFYKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKRRERLSILGE-----------------------------MTARVAHEIRNPITIIGGFIMRMKKLDDPEINIITNELSRLETIVKEILEYSK----ERVLEFTEFNLNE-LIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSDMYTKVRVSVWNSGPPIPEELKEKIFSPFFTT--------LGLSICRKIIEEHGGKIWTENREN--GVVFIFEIPK--------
9	HHPRED-g	2c2a_A	0.247	0.625	3.922	threading_9	------------------------------------------------------------------------------------------------------------------MEN-VTESK--------ELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDL-CDLVESAVNAIKEFASSHNVNVLFESNPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD-----TGLGLAITKEIVELHGGRIWVESEV-GKGSRFFVWIPKDR------
10	MUSTER	1gkzA	0.131	0.821	1.401	threading_10	VR-----LTPTMMLY---------------------------------SGRSQDGSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCN--PTILHVHELYIR-AFQKLTDFPPIKDQADEAQYCQLVRQLLDDHK------------------DVVTLLAEGLRESRKHIEYFLDKTLTSRLGIRMLATHHLALHEDKPDFVGIICTRLS-PKKIIEKWVDFARRLCEHKAPRVRIN-GHVAARFPFIPMPLDYILPELLKNAMRATMESHDVVITIANNDVLIIRISDRGGGIAHKDLDRVMDYHFT-TAPMHGFGFGLPTSRAYAEYLGGSLQLQSLQ-GIGTDVYLRLRHIDGREE--

Predicted Tertiary Structure


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TM-score=0.603 to 1ys3B SCOP code=d.122.1.3	TM-score=0.594 to 1ys3B SCOP code=d.122.1.3	TM-score=0.794 to 1gkzA SCOP code=a.29.5.1	TM-score=0.605 to 1ys3B SCOP code=d.122.1.3	TM-score=0.597 to 1ys3B SCOP code=d.122.1.3