Template-based Modeling Results for LYSQ_ECOLI

Submitted Primary Sequence

>Length 177
MNTKIRYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTMAYRDGSGIWTICRGATVVDGKTVFPNMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVIRRDQESALTCWGIEQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNTKIRYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTMAYRDGSGIWTICRGATVVDGKTVFPNMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVIRRDQESALTCWGIEQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNTKIRYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTMAYRDGSGIWTICRGATVVDGKTVFPNMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVIRRDQESALTCWGIEQ
433312200000000000000000200120023221020100211210000010001231421223240233101200121022012002310423123201010000000102123112020022022121310020021013321210213233130122101210210032234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNTKIRYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTMAYRDGSGIWTICRGATVVDGKTVFPNMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVIRRDQESALTCWGIEQ
1	MUSTER	3hdeA	0.309	0.932	3.210	threading_1	MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHT---GKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETMRGALYSFV-YNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWK-------GLMTRREIEREICLWGQQ-
2	SPARKS	3hdea	0.309	0.932	4.804	threading_2	MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHT---GKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETMRGALYSFV-YNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGK-------QWKGLMTRREIEREICLWGQQ-
3	PROSPECT2	3hdeA	0.309	0.932	2.634	threading_3	MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGH---TGKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETMRGALYSFV-YNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQ-------WKGLMTRREIEREICLWGQ-Q
4	PPA-I	3hdeA	0.309	0.932	3.266	threading_4	MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHT---GKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETMRGALYSFV-YNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWK-------GLMTRREIEREICLWGQQ-
5	HHPRED-l	3hde_A	0.309	0.932	5.347	threading_5	MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHT---GKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETMRGALYSFV-YNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQ-------WKGLMTRREIEREICLWGQQ-
6	HHPRED-g	1xjt_A	0.185	0.853	4.495	threading_6	-------CAIAV-ITIV-GNVRTNQAGLELIGNAEGCRRDPY-CPAGVWTDGIGNT----HGVTPGVRKTDQQIAADWEKNILIAERCINQHFRKD-PDNAFSA-TSA-AFN-GCNSLRETSIHKWAQKGEWVN-CNHLPDFVNSNGVPLR-------GLKIRREKERQLCLTGLVN
7	SP3	3hdea	0.309	0.932	4.957	threading_7	MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHT---GKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETMRGALYSFV-YNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWK-------GLMTRREIEREICLWGQQ-
8	SAM-T99	3hdeA	0.311	0.927	6.089	threading_8	MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHT---GKDIMLGKTYTKAECKALLNKDLATVARQINPYIKVDIPETMRGALYSFV-YNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQ-------WKGLMTRREIEREICLWGQ--
9	MUSTER	2anxA	0.283	0.819	2.806	threading_9	-------------------MMQISSNGITRLKREEGERLKAYSDSRGIPTIGVGHTGVDGNSVASGMTITAEKSSELLKEDLQWVEDAISSLVRVPLNQNQYDAMCSLI-FNIGKSAFAGSTVLRQLNLKNYQAAADAFLLWKKAGKD--------PDILLPRRRRERALFLS----
10	SPARKS	2anva	0.278	0.814	4.011	threading_10	-------------------MMQISSNGITRLKREEGERLKAYSDSRGIPTIGVGHTGVDGNSVASGMTITAEKSSELLKEDLQWVEDAISSLVRVPLNQNQYDAMCSLI-FNIGKSAFAGSTVLRQ-NLKNYQAAADAFLLWKKAGKD--------PDILLPRRRRERALFLS----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.704 to 1xjtA SCOP code=d.2.1.3	TM-score=0.711 to 1xjtA SCOP code=d.2.1.3	TM-score=0.707 to 1xjtA SCOP code=d.2.1.3	TM-score=0.698 to 1xjtA SCOP code=d.2.1.3	TM-score=0.704 to 1xjtA SCOP code=d.2.1.3