Template-based Modeling Results for AIS_ECOLI

Submitted Primary Sequence

>Length 200
MLAFCRSSLKSKKYIIILLALAAIAGLGTHAAWSSNGLPRIDNKTLARLAQQHPVVVLFRHAERCDRSTNQCLSDKTGITVKGTQDARELGNAFSADIPDFDLYSSNTVRTIQSATWFSAGKKLTVDKRLLQCGNEIYSAIKDLQSKAPDKNIVIFTHNHCLTYIAKDKRDATFKPDYLDGLVMHVEKGKVYLDGEFVNH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLAFCRSSLKSKKYIIILLALAAIAGLGTHAAWSSNGLPRIDNKTLARLAQQHPVVVLFRHAERCDRSTNQCLSDKTGITVKGTQDARELGNAFSADIPDFDLYSSNTVRTIQSATWFSAGKKLTVDKRLLQCGNEIYSAIKDLQSKAPDKNIVIFTHNHCLTYIAKDKRDATFKPDYLDGLVMHVEKGKVYLDGEFVNH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCHHHEEEEEEECCEEEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLAFCRSSLKSKKYIIILLALAAIAGLGTHAAWSSNGLPRIDNKTLARLAQQHPVVVLFRHAERCDRSTNQCLSDKTGITVKGTQDARELGNAFSADIPDFDLYSSNTVRTIQSATWFSAGKKLTVDKRLLQCGNEIYSAIKDLQSKAPDKNIVIFTHNHCLTYIAKDKRDATFKPDYLDGLVMHVEKGKVYLDGEFVNH
23210320131120000000000000000100112210230313200310442200000100231321313011222101230120023002002230331101103111001001111223311133102201230020012131313331000000110011004234323232311000000023120101011246
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLAFCRSSLKSKKYIIILLALAAIAGLGTHAAWSSNGLPRIDNKTLARLAQQHPVVVLFRHAERCDRSTNQCLSDKTGITVKGTQDARELGNAFSADIPDFDLYSSNTVRTIQSATWFSAGKKLTVDKRLLQCGNEIYSAIKDLQSKAPDKNIVIFTHNHCLTYIAKDKRDATFKPDYLDGLVMHVEKGKVYLDGEFVNH
1	MUSTER	1ujbA	0.119	0.715	1.447	threading_1	-----------------------------------------------------MQVFIMRHGDAALDAAS---DSVRPLTTNGCDESRLMANWLKGKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELGLVSAYLQALTNE-GVASVLVISHLPLVGYLVAELCPGETPPMFSAIASVTLDSGNGTFNWQMSPC
2	SPARKS	1ujba	0.135	0.705	2.216	threading_2	-----------------------------------------------------MQVFIMRHGDAALDAAS---DSVRPLTTNGCDESRLMANWLKQKVEIERVLVSPFLRAEQTLEEVGDCSSAEVLPELTPCGGLVSAYLQALTNEGVA-SVLVISHLPLVGYLVAELCPGETPPMFSAIASVTLDSGNGTFNWQM--S
3	PROSPECT2	1ujbA	0.111	0.720	1.195	threading_3	M-----------------------------------------------------QVFIMRHGDAALDAAS---DSVRPLTTNGCDESRLMANWLGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAEPGETPPMFTTSAIASVTLDESGNGTFNWQMSK
4	PPA-I	1ujbA	0.125	0.720	1.983	threading_4	-----------------------------------------------------MQVFIMRHGDAALDAAS---DSVRPLTTNGCDESRLMANWLKGKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPEDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFSAIASVTLDSGNGTFNWQMSPC
5	HHPRED-l	1h2e_A	0.199	0.730	2.675	threading_5	----------------------------------------------------ATTLYLTRHGETKWNVERRMQGWDSPLTEKGRQDAMRLGKRLE-AVELAAIYTSTSGRALETAEIVRGGIPIYQDERLREIHLGDWEAVQSIVDRHEGETVLIVTHGVVLKTLMAAFKDTPLDMYGTSVTIIEVDGGTFHVAVGDVS-
6	HHPRED-g	1ujc_A	0.111	0.720	2.633	threading_6	-----------------------------------------------------MQVFIMRHGDAALDAA---SDSVRPLTTNGCDESRLMANWLKQKVEIERVLVSPFLRAEQTLEEVGDCLPSSAEVLPLTPCGDVGLVSAYLQTNEGVASVLVISHLPLVGYLVAELCPGETPFTTSAIASVTLDSGNGTFNWQMSPC
7	SP3	1ujba	0.142	0.705	2.084	threading_7	-----------------------------------------------------MQVFIMRHGDAALDAAS---DSVRPLTTNGCDESRLMANWLKGKVEIERVLVSPFLRAEQTLEEVGDCSSAEVLPELTPCGGLVSAYLQALTNEGVA-SVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTSGNGTFNWQM--S
8	SAM-T99	2axnA	0.152	0.920	3.594	threading_8	-LDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYLMNIHVQ------PRTIYLCRHGENEHNLQGR-IGGDSGLSSRGKKFASALSKFVEQNLKDLRVWTSQLKSTIQTAEALRLYYRYPTGESYQDLVQRLEPVIMELERQ---ENVLVICHQAVLRCLLAYFLDKAEEMPYLKCPLHTVLKLTPVAYG-----
9	MUSTER	2rflH	0.151	0.730	1.355	threading_9	-------------------------------------------------ASFPTRVYLLRHAKAAWAAPGER-DFDRGLNEAGFAEAEIIADLAADRYRPDLILSSTAARCRQTTQAWQRAFIDIVYIDEYNARS---ETYLSLIAAQTEVQSVLVGHNPTEATLEAIGEDLALPSGFSGLAVLDQDKNRWRLIDFLAP-
10	SPARKS	3f2ia	0.169	0.680	2.086	threading_10	------------------------------------------------------ELYLIRHGIAEAQIKD----EERELTQEGKQKTEKVAYRLVLGRQFDLIVTSPLIRARQTAEILLASCQLEESNHLAPNGFNWLDYWLKPKNFPENAQIAIVGHEPCLSNWTEILLWGEAKDS------LVLKKAGIGLLPEIGSP

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.596 to 1h2fA SCOP code=c.60.1.1	TM-score=0.599 to 1h2fA SCOP code=c.60.1.1	TM-score=0.609 to 1h2fA SCOP code=c.60.1.1	TM-score=0.603 to 1h2fA SCOP code=c.60.1.1	TM-score=0.601 to 1fztA SCOP code=c.60.1.1