Template-based Modeling Results for ABRB_ECOLI

Submitted Primary Sequence

>Length 348
MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA
351110000000000000001002000000000000000010121203003101200000000001130102102201310120000000000000000100130121101000001011000000000232223121000010010000000000002101123131123212211210000000000000000001103011010000000000020021120300310100000000010001023300220231012001000010000000010003112020000000001100000000001030110000001001000000000000200122133434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA
1	MUSTER	3zuxA	0.153	0.862	1.225	threading_1	----------------NILSKISSIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPVGVILVGCCPGGTASNVMTYLA-RGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGM------LMSIVKMVLLPIVLGLIVHKV-LGS---------KTEKLT---------DALPLVSVAAIVLIIGAVV-GASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-----
2	SPARKS	3zuxa	0.154	0.859	1.261	threading_2	----------------NILSKISSFIGKTFSLWAALFAAAAFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPVGVILVGCCPGG-TASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQ----------AAGMLMSIVKM----------------VLLPIVLGLIVHKVGSKTEKLTDALPLVSVAAIVLIIGAVV-GASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-----
3	PROSPECT2	1jdha	0.115	0.997	1.806	threading_3	KKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLLVQNCLWTLRNLSDAATKQEGMEGLLGSDDINVVTCAAGILSGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEPSHWPLIKATVGLIRNLALCPANHAPLREAIPRLVQLLVRAHQMEEIVEGCTGALHILARDVHNRIVIRGL-NTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAPLTELLHSRNS
4	PPA-I	3zuxA	0.150	0.865	1.778	threading_4	-------------NILSKISSFI--GKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPVGVILVGCCPGGTASNVMTYLA-RGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEM----------------------LEIQAAGMLMSIV----KMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-----
5	HHPRED-l	3zux_A	0.149	0.848	2.192	threading_5	----------------NILSKISSFIGKTFSLWAALFAAAAFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIILVGCCPGGTASNV-MTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEM------LEIQAAGMLMSIVKMVLLPIVLGLIVHKV-LGSK--------------TE--KLTDAPLVSVAAVLIIGAVVGAS--KGKI---MESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKIGMQNSGLAA--ALAAAFAAAPV-VAVPGALFSVWHNISGSLLATYWAAKA-----
6	HHPRED-g	3zux_A	0.149	0.848	3.604	threading_6	----------------NILSKISSFIGKTFSLWAALFAAAAFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIILVGCCPGGTASNV-MTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEM----------LEIQAAGMLMSIVK----------------MVLLPIVLGLIVHKVLGSKLTDA--LPLVSVAAIVLIIGAVVGAS-KGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKIGMQNSGLA--AALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-----
7	SP3	3zuxa	0.157	0.862	1.163	threading_7	---------NILSKISSFIGKTF---SLWAALFAAAAFFAPDTFKWA---GPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPVGVILVGCCPGGTASNVMTYL-ARGNVALSVAVTSVSTLTSPLLTPAIFLMLAG----------EMLEIQAAGMLMSIVKM----------------VLLPIVLGLIVHKVGSKTEKLTDALPLVSVAAIVLIIGAVV-GASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-----
8	SAM-T99	1wyzB	0.145	0.514	0.787	threading_8	----------------------------------LLPVTLGDTPLEQVLPSYNTEIIRGI----------RHFIVEDVRSARRFLKKVDREIDIDSLTFYPLNKHTSPEDISGYLKPLAGGASGVI--SEDPGADVVAIAQRQKLKVIPLVGPSSIILSVASGFN-GQSFAKIEDILQNCRPQTKLCIAANITCE------------------------------------------------GEFIQTRTVKDWKGHIPELSKIPCIFLLYKL--------------------------------------------------------------------------
9	MUSTER	3hfwA	0.123	0.937	0.875	threading_9	--MEKYVAAMVLSAAGDALGYY-NGKWEFLDGEKIHRQLAQLGGLALDVGRDDTVMHLATAEALVEAGKAPK-LTQLYYLLAKHYQDCMEDMGASVHNAMQLKPGKPNGWRIPF-EGGCGAAMRAMCIGLRFPHHSQLDTLIQVSIESGRMPTGYLGALASALFTAYAVNSRPPLQWGKGLMELLPEAKKYIVQSGYFVEENLQHWSYFQTKWENYLKLRGILDGESAPTFP-------------SFGVKERDQFYTSLSY-SGWGGSSGHDAPMIAYDAVLAAGDSWKELAHRAFGGDSDSTAAIAGCW---WGVMYGFKLEYRNRLEETARALYSLGSKEDTVISL
10	SPARKS	1kpla	0.138	0.917	1.101	threading_10	AFLLWPLAFILSALLAMVGYFLVRKFAPEAGGSGIPEIEGALEELRPVRWWRVLPVKFIGGMGTLGAGMV--------------LGREGPTVQIGGNLGRMVLDVFRMRSAEARHTLL--ATGAAAGLSAAFNAPLAGILFIIIKAVFTGVIMSSIVFRIFNGEAPIIEVGKLSDAPVLWLYLILGIIFGVVGPVFNSLVLHGGEIKKWVLMGGAIGGLCGILGLIEPLFIFITRVVTTLLCFSSGAPGGI-------FAPMLALGTLLGTAFGMAAAVLFPQYHLEAGTFAIAGM------GALMAASVRALTGIVLVLEMYQLILPMIITCLGATLLAQFLGGKPL

Predicted Tertiary Structure


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TM-score=0.409 to 2q7nB SCOP code=a.26.1.1	TM-score=0.406 to 1kd9A SCOP code=h.1.3.1	TM-score=0.414 to 2q7nB SCOP code=a.26.1.1	TM-score=0.629 to 1wa5B SCOP code=a.118.1.1	TM-score=0.411 to 2q7nB SCOP code=a.26.1.1