Template-based Modeling Results for YPJI_ECOLI

Submitted Primary Sequence

>Length 90
MSNSEGWXSFXQTLSGLPQWASADCVAGPLVSAGITDINIEDDQGIHVRLIVRDAEGRMVWRAWNFEPDAGEGFNRYIHRSGIRTDTFPR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSNSEGWXSFXQTLSGLPQWASADCVAGPLVSAGITDINIEDDQGIHVRLIVRDAEGRMVWRAWNFEPDAGEGFNRYIHRSGIRTDTFPR
CCCCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSNSEGWXSFXQTLSGLPQWASADCVAGPLVSAGITDINIEDDQGIHVRLIVRDAEGRMVWRAWNFEPDAGEGFNRYIHRSGIRTDTFPR
555231212002002201421102020010001012202032131000000011131200000002222002001100141223233234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSNSEGWXSFXQTLSGLPQWASADCVAGPLVSAGITDINIEDDQGIHVRLIVRDAEGRMVWRAWNFEPDAGEGFNRYIHRSGIRTDTFPR
1	SPARKS	2hjja	0.621	0.733	3.379	threading_1	--------------------GPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTD----
2	PROSPECT2	2hjjA	0.591	0.733	1.310	threading_2	--------------------GPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIR----TD
3	PPA-I	2hjjA	0.621	0.733	4.894	threading_3	--------------------GPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTD----
4	HHPRED-l	2hjj_A	0.621	0.733	9.355	threading_4	--------------------GPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTD----
5	HHPRED-g	2hjj_A	0.621	0.733	7.852	threading_5	--------------------GPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTD----
6	SP3	2hjja	0.621	0.733	1.896	threading_6	--------------------GPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTD----
7	SAM-T99	2hjjA	0.621	0.733	6.556	threading_7	--------------------GPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTD----
8	SPARKS	2vqga	0.043	0.767	0.670	threading_8	LSPQYNWACILEGGLLEEGQYNRELAEAIAAKGEGFWTTQFPQI---------------GDWN-EDQAAALADRAQT-CGLVKADT----
9	PROSPECT2	1i12a	0.100	1.000	0.566	threading_9	LPDGGDLEQVTETLKVLTTVGTITPESFCKLIKYWNEATVWNDKKIMPMVIVDKRTETVAIIERKIIHELGDQLVTIGFDYGCYKMQIRK
10	PPA-I	2f4qA1	0.015	0.722	0.842	threading_10	--PSRTELAEYLRREPQKFRLARIARLAVPPAYQDVYVSPDAENELQAFGRDAAGRLQYRYFVQAGA-----------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.863 to 2hjjA SCOP code=d.50.3.3	TM-score=0.860 to 2hjjA SCOP code=d.50.3.3	TM-score=0.863 to 2hjjA SCOP code=d.50.3.3	TM-score=0.863 to 2hjjA SCOP code=d.50.3.3	TM-score=0.862 to 2hjjA SCOP code=d.50.3.3